KEGG   Mycobacterium heckeshornense: JMUB5695_03088
Entry
JMUB5695_03088    CDS       T07325                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
mhek  Mycobacterium heckeshornense
Brite
KEGG Orthology (KO) [BR:mhek00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mhek03016]
    JMUB5695_03088
Enzymes [BR:mhek01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     JMUB5695_03088
Transfer RNA biogenesis [BR:mhek03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    JMUB5695_03088
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: BCQ09638
LinkDB
Position
3194744..3196009
AA seq 421 aa
MCNAAPAQRGVQAEPTPLLHPAEGVPELSATVGEIAAAAELLAGGHGPFAVDAERASGFR
YSNRAYLIQIRRAGAGTVLIDPVSHGSDPAAVLRPVAEVLAGDEWILHAADQDLPCLAEV
GMRPPALYDTELAGRLAGFERVNLAAMVQRLLGLSLAKGHGAADWSKRPLPAAWLNYAAL
DVEVLIELRAAIASVLAEQGKTRWATEEFEYLRASAVRGAPSTRRDHWRRTSGIHRVRDR
RGLAAVRELWTVRDRIAQRRDIAPGRVLPDSAIIDAAIADPKTVEDLTALPVFGGPKQRR
SAATWLAALEAARHNPEPVDEVEPPNGPPAPARWVKRRPQAAARLDAARAALAELSQRVS
VPAENLISPDLVRRLCWDWDGGSQADSERVIDEFLAAGQARAWQRELVVPVLAAALQQAA
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgtgcaatgcggccccagcgcagcgtggcgtccaggccgagcccaccccgctgctgcac
ccggccgagggggtgcccgagctctcggcgacggtcggcgagatcgccgcggccgccgag
ctgctggccggtggtcacgggccgttcgcggtcgacgccgagcgggcgtcgggtttccgc
tactccaaccgggcctatctgatccagatccgccgcgccggtgcgggcaccgtgctcatc
gatccggtcagccatggaagcgacccggcggccgtgttgcggccggtcgccgaagtgctc
gccggggacgaatggattttgcacgccgccgaccaggatctgccgtgcctggccgaagtg
ggcatgcggccaccggcgctgtatgacaccgaattggccggacggctggccggattcgaa
cgcgtgaacctggcggccatggtgcagcggctcctcgggctgagcctggccaagggccac
ggcgcggccgactggtccaagcgtccactgccggcggcgtggctgaactatgccgccctg
gacgtcgaagtcctcatcgaactgcgcgcggcgatcgcgtccgtgctggcggagcaaggg
aaaacacgttgggccacagaggaattcgaatacctgcgcgccagcgcagtgcggggggcg
ccgagcacccgccgcgatcattggcgacgcacgtcgggcatccatcgggtccgcgaccgg
cgcggactggccgcggttcgcgagttgtggaccgtacgcgaccggatcgcccagcgccgc
gacatcgcccccggccgcgtcctgcccgattcggccatcatcgacgcggcgatcgccgac
ccgaagacggtcgaggacctgaccgctttgccggtgttcggcgggcccaagcagcgccgc
agcgccgcgacctggctggcggcgctggaggcggccaggcacaaccccgagcccgtggac
gaggtcgagccgcccaacgggccgccggccccggcgcggtgggtcaagcgcagaccgcag
gccgccgcgcggctggatgcggcccgggcagcgctggcggagttgtcgcagcgggtgtcg
gtgcccgcggagaacctgatctcccccgacctggtgcgacggctgtgctgggactgggac
ggcggatcacaggccgacagcgagcgggtgatcgacgagtttctcgccgccgggcaggct
cgcgcctggcagcgcgagctcgtggtcccggtgttagccgccgcgctgcagcaggccgcc
ggctag

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