Mycobacterium heckeshornense: JMUB5695_03327
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Entry
JMUB5695_03327 CDS
T07325
Symbol
fpg1
Name
(GenBank) formamidopyrimidine-DNA glycosylase 1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mhek
Mycobacterium heckeshornense
Pathway
mhek03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mhek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JMUB5695_03327 (fpg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhek03400
]
JMUB5695_03327 (fpg1)
Enzymes [BR:
mhek01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
JMUB5695_03327 (fpg1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JMUB5695_03327 (fpg1)
DNA repair and recombination proteins [BR:
mhek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JMUB5695_03327 (fpg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DUF4520
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
BCQ09877
LinkDB
All DBs
Position
complement(3426142..3426999)
Genome browser
AA seq
285 aa
AA seq
DB search
MPELPEVEVVRRGLQTHVVGKTVTAIRVHHPRAVRRHEAGPADLTARLLGARITGTDRRG
KYLWLRLDEADTALVVHLGMSGQMLLGAVPNTAHLRIAAMLDDGTALSFVDQRTFGGWLL
AELVTVDGSAVPVPVAHLARDPLDSKFDADAVVNVMRRKHSELKRQLLDQTVVSGIGNIY
ADEALWRAKVHGSRVAATLPRRQLAAVLQAAAEVMCDALAHGGTSFDSLYVNVNGESGYF
DRSLDAYGREDQPCRRCGSLIRREKFMNRSSFYCPRCQPRPRLRR
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactaccggaagtcgaggtggtgcggcgcggcctgcaaacccatgtggtggga
aagaccgtcacggcgatccgagttcaccacccccgcgcggtgcgccggcacgaagccggg
cccgcggacctgaccgcgcggctgctcggcgcgcgcatcaccggcaccgatcgtcgcggt
aaatacctgtggctgagattggatgaggccgacaccgcgctggtggtgcatctgggcatg
agcgggcagatgctgctaggtgccgtcccgaataccgcgcacctgcgcatcgcggcgatg
ctcgacgacggcaccgcgctgagcttcgtcgatcagcgcactttcggcggctggctgctg
gccgagttggtaacggtcgacggcagcgcggtaccggtgcccgtggcccacctggctcgc
gatccgctggactcgaaattcgatgccgacgcggtggttaatgtgatgcggcgcaagcat
tccgagctcaaacgccagcttctcgaccagaccgtggtgtcaggcatcggcaacatctac
gccgacgaggcactgtggcgcgccaaggtgcacggctcgcgcgtggccgccacgctgccg
cgccggcagctggcggcggtgctgcaggccgccgcggaggtgatgtgcgacgcgctggcc
cacggcgggacctcgttcgattcgttgtacgtcaacgtcaacggtgaatcggggtacttc
gaccgctcgctcgacgcgtacggtcgcgaggaccagccgtgccgacgctgtggctcgctg
attcggcgcgagaagttcatgaaccgctcgtcgttttattgcccgaggtgccagccgcgg
ccgcggcttcgccgctga
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integrated database retrieval system
