KEGG   Mycobacterium heckeshornense: JMUB5695_03693
Entry
JMUB5695_03693    CDS       T07325                                 
Symbol
sigF
Name
(GenBank) RNA polymerase sigma factor SigF
  KO
K03090  RNA polymerase sigma-B factor
Organism
mhek  Mycobacterium heckeshornense
Brite
KEGG Orthology (KO) [BR:mhek00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mhek03021]
    JMUB5695_03693 (sigF)
Transcription machinery [BR:mhek03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     JMUB5695_03693 (sigF)
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_3 HTH_23 HTH_24 MarR Sigma70_ECF HTH_Crp_2 HTH_20 HTH_IclR MarR_2 DUF7343 KORA HTH_31
Other DBs
NCBI-ProteinID: BCQ10238
LinkDB
Position
complement(3795949..3796674)
AA seq 241 aa
MFRELAGLLPDSPEFQRQRDKIVERCLPLADHIARRFEGRGEPRDDLVQVARVGLVNAVV
RFDVDAGSDFVSFAVPTIMGEVRRHFRDNSWSVKVPRRLKELHLRLGTATADLSQRLGRA
PTATELADELDMDRTEIVEGLVAGSSYNTLSIDSGGNNADEDARAIADTLGDVDAGLERI
ENREALRPLLDALPERERTVLVLRFFESMTQTQIAERVGISQMHVSRLLAKSLARLRDQL
E
NT seq 726 nt   +upstreamnt  +downstreamnt
atgttccgcgagctggctggcctcctgcccgactcgccggaattccagcggcagcgcgac
aagattgtggagcgttgcctgccgctggccgaccacattgcccgccggttcgagggccgc
ggcgaaccgcgcgacgacctcgtgcaggtggcccgggtcgggctcgtcaacgcggtcgtc
cgcttcgacgtcgacgccggctcggacttcgtctcgttcgcggtgcccacgattatgggg
gaggtccggcggcactttcgtgacaacagctggtcggtcaaggtgccgcggcgtctgaaa
gaactgcacctgcggctcggcacggctaccgccgacttgtcgcaacggctcggccgcgcg
cccaccgctaccgagctcgccgacgaactcgacatggaccgcaccgagatcgtcgaggga
ctggttgccggtagttcctacaacacgttgtcgatcgatagcggcggcaacaacgccgac
gaagacgcccgcgctatcgccgacactctcggcgacgtggacgccggtctggagcggatt
gaaaaccgtgaggcgctacgtccgctgctggatgcgctgccggagcgcgaacgaacggta
ttggtgctcaggtttttcgagtcaatgacacagacgcaaatcgccgagcgcgtcggcatc
tcgcagatgcatgtgtcgcgcctgctggcgaagtccttagcgcgattgcgagatcagctg
gagtag

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