Mycobacterium heckeshornense: JMUB5695_03709 Help Entry JMUB5695_03709    CDS       T07325                                  Symbol srmB Name (GenBank) ATP-dependent RNA helicase SrmB   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism mhek  Mycobacterium heckeshornense Brite KEGG Orthology (KO) [BR:mhek00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:mhek03400]     JMUB5695_03709 (srmB) Enzymes [BR:mhek01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      JMUB5695_03709 (srmB)     5.6.2.6  RNA 3'-5' helicase      JMUB5695_03709 (srmB) DNA repair and recombination proteins [BR:mhek03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     JMUB5695_03709 (srmB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WHD_Lhr WHD_4th_Lhr WHD_2nd_Lhr DEAD WHD_3rd_Lhr Helicase_C ResIII AAA_25 Cas3-like_C_2 PhoH DUF6406 AAA_22 NAD_binding_3 EutK_C Motif Other DBs NCBI-ProteinID:  BCQ10254 LinkDB All DBs Position 3809247..3813755 Genome browser AA seq 1502 aa AA seqDB search MSAASLARFSAPTREWFANTFAAPTPAQAGAWSAIADGHNTLVIAPTGSGKTLAAFLWAI DRLAGAPQRRAGTRVLYVSPLKALAVDVERNLRAPLAGITRVAQRRGRPMAPISVGVRSG DTPPERRRRLVAEPPDVLITTPESLFLMLTSAARQTLTDVQTVIVDEVHALAGTKRGAHL ALSLERLEELLARPAQRIGLSATVRPAEEVARFLSGQRPTTIVAPPSAKTIDLTVQVPVP DMANLADNTIWPDVEARLVDLIESHNSTIVFANSRRLAERLTARLNEIHADRAGVELDTG RNRQVAGGAPAQLLGSGQTCGAPTLLARAHHGSVSKEQRAAVEEDLKRGRLKAVVATSSL ELGIDMGAVDLVIQVAAPPSVASGLQRIGRAGHQVGEISKGALFPKHRTDLIGCAVAAQR MLAGEIEAMRIPTNPLDILAQHTVAAAALEPLDADRWFDTVRRSASFATLPRSAFEATLD LLCGKYPSTEFAELRPRLVYDRDSGTLTARPGAQRLAVTSGGAIPDRGLFTVWLATEKPS RVGELDEEMVYESRPGDVISLGATSWRITEITHDRVLVIPAPGQPARLPFWRGDDIGRPA ELGRAIGAFTGELAALDRNAFKKRCAALGLNEYATENLWRLLDDQRSATAAVPTDTTLLV ERFRDELGDWRVILHSPYGLRVHGPLALAVGRRLAERYGIDEKPTASDDGIVVRLPDADA AATPPGAELFVFDPDDIDPVVTDEVGGSALFASRFRECAARALLLPRRHPGRRSPLWHQR QRAAQLLDVARKYPDFPIVLEAIRECLQDVYDVPGLTTLMADIAGRRVRVVEAETATPSP FAASLLFGYVGAFMYEGDAPLAERRAAALSLDTTLLAELLGRVELRELLDPDVIAATGRQ LQHLSADRMARDAEAVADLLRLLGPLTEEEVAARAGGKDVGGWLEGLRAARRALTVSFAG RTWWVAVEDIGRLRDGVGVAVPVGVPDSFTEAVADPLGELLGRYARTRTPFTTAEAAARF GLGLRVTADVLGRLAADGRLVRGDFVADVAGEQWCDAEVLRILRRRSLAALRAQVEPVST AAYARFLPAWQQVGSETNSGPDGLLAVIDQLAGVRMPASAIEPLVLAPRVRDYSPAMLDE LLASGEVMWSGAGSISGSDGWIAFHSADTAPLTLSPGAAVKFNDAHRAILDTLAGGGAFF FRQLGNGIGDEELKTALWELIWAGWITGDTFAPVRAMLSGGPGTRKRAAPAHRHRRPPRL SRYSVAHAQTRAIDPTVTGRWSALPAPEPDSTLRAHHQAELLLNRHGVLTKGAVAAEGVP GGFATLYKVLTAFEDAGRCQRGYFVESLGGAQFAVTSTVDRLRSYLDNVDPERPEYQAVV LAAADPANPYGAALPWPAARPSDDEGVGRPGRKAGALVVLVDGELAWFLERGGRSLLTFT DDPDTQHAAAAALADLVGARRLDSILVERVNSVPVLELRESPIHAALSAAGFARTPRGLR LR NT seq 4509 nt NT seq  +upstreamnt  +downstreamnt gtgagcgccgcatcgctggctcgcttttccgccccgacacgggagtggttcgccaacacc tttgccgcgccgaccccagcccaggccggcgcctggtcggcaattgccgacggccacaac acgctggtcatcgcgccgaccggatccggtaagacgctggccgcattcctgtgggcgatc gacaggttggccggcgcaccgcaacggcgcgccggcacccgggtgctttacgtgtcgccg ctgaaggcgctggccgtcgacgtcgagcgcaacctgcgcgccccgctggccggtatcacc cgggtcgcccagcggcgaggtcggccgatggcgccgatcagcgtgggcgttcgatccggt gacaccccgcccgagcgtcgtcgccggctcgtcgccgagccgcccgatgtgctgatcacc acaccggagtcgctgtttttgatgctgacctcggcggcacgccagacgctcactgacgtg caaacggtcatcgtcgacgaggtgcacgccctcgcgggcaccaaacgcggggcgcatctg gcgttgtcgctggagcgactcgaagagctgctggcgcgccccgcgcagcgcatcgggttg tcggcaaccgtgcggcccgccgaggaggttgcccggttcctctcggggcagcgaccgacc acgatcgtcgcgccgccgtcagcgaaaaccatcgacctcacggtgcaggtgcccgtcccc gacatggccaacctcgccgacaacaccatctggcccgacgtcgaggcccgcctggtcgac ctgatcgagtcgcacaactcgacgatcgtgttcgccaactcgcggcggctcgccgaacga cttaccgcccggctcaacgagattcacgctgaccgcgccggagtcgagctcgacaccggg cgcaaccggcaagtcgccggcggcgcgccggcccaattgctgggtagcggccaaacctgc ggcgccccaacgctgttggcccgcgcccatcatggttcggtcagcaaagagcaacgcgca gcggtcgaggaggacctcaaacgcggccggctcaaagccgtcgtcgcgacctcgagcctg gagctgggcatcgacatgggcgcggtcgatctggtgatccaggtcgcggcgccgccgtcg gtggccagcggcctgcaacgcatcggccgggccggccaccaggtcggcgaaatctcgaag ggcgcgctgttcccgaagcaccgcaccgacttgatcggctgcgcggtggccgcccagcgc atgctggccggagaaatcgaggcgatgcgcatacccaccaatccgctggacatcctggcg cagcacaccgtggcagccgctgcgctcgagccgctggacgcagaccgctggttcgacact gtgcggcgcagcgcgtcgttcgccaccttgccgcgcagcgcgttcgaggccaccttggat ctgctctgcggcaagtatccctcgaccgaattcgccgaactgcggccacgattggtctac gaccgcgacagcggcactttgaccgcgcggcccggcgcgcagcggctggcggtcacctcc ggcggcgcgatccctgaccgcgggctgtttaccgtgtggctggcaaccgaaaaaccatcg cgggtcggcgaactcgatgaggagatggtctacgagtcccgcccgggcgacgtcatctcc ctgggtgcgaccagctggcggatcaccgagatcacccacgaccgggtgctggtgatccct gccccggggcagccggcgcggctgccgttctggcgcggcgacgacatcggtcgcccggcc gagctgggccgcgcgatcggcgcgttcaccggcgaactggccgcactggaccgcaatgct ttcaaaaagcgttgtgctgcactgggtttgaacgaatacgcaactgaaaacctgtggcgg ctgctcgatgaccagcgcagcgccaccgccgcagtgcccaccgacaccaccctgctggtg gaacggttccgcgacgagctcggcgactggcgggtgatcctgcactcgccgtacgggttg cgggtacatggcccgctggcgctggccgtgggccgtcgcctggcggaacgctacgggatc gacgagaaaccgaccgcttccgacgacggcatcgtggtgcgcctgccggatgccgatgcc gccgcgacaccgcccggtgcggagctgttcgtgttcgaccccgacgacattgatccggtc gtcaccgacgaagtgggtggttcggcgctgttcgcctcgcgttttcgggaatgcgcggcc cgcgcattgctgctgccacggcgacaccccggtcgccgctcgcccctgtggcaccaacgc cagcgcgccgcccaactgctcgacgtggcccgcaaataccccgactttccgatcgtgctg gaagcgatccgtgaatgcctgcaggacgtctatgacgtgccgggcctgaccaccctgatg gccgacatcgccggccgccgggtccgggtggtggaggccgagaccgccacaccgtcaccg ttcgcggcatcgctgctgttcggctacgtcggcgcgttcatgtacgagggcgatgccccg ctggccgagcgccgggctgcggccctgtcgctggataccacgctgctggccgagctgctc ggccgcgtcgaactgcgtgagctgctggaccccgacgtcatcgccgcgaccgggcgccag ttgcagcacctgtcggccgaccggatggcccgcgatgccgaagcggttgccgatctgctg cggctgctgggcccgctgaccgaagaagaggtcgccgcccgggccggcggcaaagatgtg ggcggctggctggagggtctgcgggccgccagacgcgcgctgacggtgtcgttcgccggg cggacctggtgggtggctgtcgaggacatcggccggctgcgcgacggcgtcggggtcgcg gtgccggtcggcgtgcccgatagtttcaccgaggcggttgccgacccgctcggtgagctg ctcggccgctacgcgcgcacccgtaccccgtttactaccgccgaagccgccgcccggttc ggcttgggtctgcgcgtgacggccgacgtgctgggccggctggccgccgacgggcgcctg gtgcgcggcgatttcgtcgccgacgtcgcgggcgagcagtggtgtgacgccgaggtgttg cggattctgcgacgccgatcgctggctgcgttgcgggcccaggtcgagccggtcagcacc gcggcatatgcgcggttcctgccggcctggcagcaggtgggcagcgaaaccaattccggt cccgacgggttgctggccgtcatcgatcagctcgccggcgtacggatgcccgcatcggcg atcgagccgctggtgctggcaccgcgggtacgtgactactcaccggcgatgctcgacgag ctgctggcctccggcgaggtgatgtggtctggcgccggctcgatttcgggcagcgatggc tggatcgcattccattccgccgataccgcgccgttgacgttgagcccgggcgccgcagtc aagttcaacgacgcccaccgcgcaatcctggataccctggccggcggcggcgcgttcttc ttccgccagcttggcaacggcatcggtgacgaagaactgaaaacagcgttgtgggaattg atttgggcgggctggatcaccggcgacacgttcgcgccggtgcgcgcgatgctcagcggt ggcccgggcactcgtaaacgtgccgccccggcgcaccggcaccggcgaccgccgcggctg agccgctacagtgtcgcccacgcccagacccgggccatcgaccctaccgtcaccggccgg tggtcggcgttgcccgcgccggagccggattcgacgttgcgcgcacaccatcaggccgaa ctgctgctgaaccgccacggcgtactgaccaagggcgcggtcgcggccgaaggagtgccc ggcgggttcgccacgctgtacaaggtgctgaccgcgttcgaagacgccggccgctgtcaa cgcggctacttcgtggaatcgttgggcggcgcccagtttgcggtcacctcgaccgtcgac cggttgcgcagctacctcgacaacgtcgaccctgagcggcccgaataccaggcggtggtg ctagccgccgccgaccccgccaacccctacggcgcggcactgccctggccggcggcgcgg ccctcggacgacgaaggggtcggccgaccgggccgcaaggcgggggcgttggtcgtgctg gtggacggcgagctggcctggttcctggagcgcggcgggcgatcgctgctaacgttcacc gacgatcccgacacccagcatgcggccgcggcggcgctggcggatctggtcggcgcacgg cgcctcgactcgatcctggtcgagcgggtcaacagcgtgccggtgctggagttgcgggag tcgccgattcacgcggcactgtccgccgccgggtttgcgcgcaccccgcgtgggctgcgg ctgcggtaa

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