Mycolicibacter heraklionensis: K3U94_03810
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Entry
K3U94_03810 CDS
T07612
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mher
Mycolicibacter heraklionensis
Pathway
mher03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mher00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K3U94_03810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mher03021
]
K3U94_03810
03400 DNA repair and recombination proteins [BR:
mher03400
]
K3U94_03810
Enzymes [BR:
mher01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K3U94_03810
Transcription machinery [BR:
mher03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K3U94_03810
DNA repair and recombination proteins [BR:
mher03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K3U94_03810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QZA08448
UniProt:
A0A9X7ZIB7
LinkDB
All DBs
Position
799947..803897
Genome browser
AA seq
1316 aa
AA seq
DB search
MLDVNFFDELRIGLATAEDIRQWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITSVDTEMRHNELSTLEAEMVVEKKAVEDQRDADLEARAQKLEAD
LAELEAEGAKADVRRKVRDGGEREMRQLRDRAQRELDRLDNIWDTFVKLAPKQLIVDETV
YRELVDRYGEYFTGAMGAESIQKLIETFDIDAEAELLRDIIKNGKGQKKLRALKRLKVVA
AFQQSGNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYYLTTEIEGETGEYT
PAAKDRPEAGVYSSPAEAIMAVDRGALSVRAKIKVRLDQLRPPAEVETELFGENGWRPGG
AWIAETTLGRVLFNELLPTGYPFVNKQMHKKVQAVIINDLAERYPMIVVAQTVDKLKDAG
FYWATRSGVTVSMADVLVPPRKKEILDSYEARADKVEKQFQRGALNHDERNEALVEIWKE
ATEEVGQALRDHYPADNPIITIVDSGATGNFTQTRTLAGMKGLVTNPKGEFIPRPIKSSF
REGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREHDCGTERGIIVD
LAEPQADGSLIRNPFIETSAYARTLAMDAADSNGKVVVERGHDLGDPSIEALLAAGISQV
KVRSVLTCTTGTGVCATCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGV
GEDITGGLPRVQELFEARIPRGKAPIADVAGRVQLEEGEKFYKITIVPDDGGEEVVYDKL
PKRQRLRVFKHEDGSERLLSDGDHVEVGQQLMEGSADPHEVLRVQGPREVQIHLVNEVQQ
VYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLTERAEFETENRRVVAEGGEP
AAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLQGLKENVIIGKLIPA
GTGINRYRNITVQPTEEARAAAYTIPSYEDQYYSPDFGAATGAAVPLDDYGYSDYR
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgatgagctccgcatcggcctggcgaccgcggaggacatc
cggcaatggtcctacggtgaggtcaagaagccggaaacgatcaactaccgcaccctcaag
cccgagaaggacggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggcaagtacaagcgggtgcgcttcaagggcatcatctgtgagcgctgtggcgtt
gaggtgactcgcgccaaggtgcgtcgtgagcggatgggccacatcgaactggccgccccg
gtcacccacatctggtacttcaagggcgtgccgtcccgcttgggctacctgctggacctg
gcgcccaaggacctcgaaaagatcatctacttcgcggcctacgtcatcaccagcgtcgac
accgagatgcgccacaacgagctgtccactttggaagccgagatggtcgtcgagaagaag
gccgtcgaagaccagcgcgacgccgacctggaggcccgcgcccagaagctggaggccgac
ctggccgagctggaggccgagggtgcgaaagccgatgtgcgccgcaaggttcgcgacggc
ggcgagcgcgagatgcgtcagctgcgcgaccgtgcccagcgtgagctggaccgcctcgac
aacatctgggacaccttcgtcaagctggctcccaagcagctgatcgtcgacgagaccgtc
taccgcgagctggtggaccgctacggcgagtacttcaccggtgcgatgggtgccgagtcg
atccagaagctgatcgagaccttcgacatcgacgccgaggccgagctgctgcgcgacatc
atcaagaacggcaaggggcagaagaagcttcgtgctctcaagcgccttaaggtggtcgcc
gcattccagcagtcgggtaactccccgatgggcatggtgctcgacgcggtgccggtgatt
ccgccggagctgcgtccgatggtgcagctcgacggtggccggttcgccaccagcgacctc
aacgacctgtaccgccgggtcatcaaccgcaacaaccgcctcaagcgactgatcgacctc
ggcgcccccgagatcatcgtcaacaacgagaagcggatgctgcaggagtccgtcgacgcg
ctgttcgacaacggccgtcgcggccgcccggtcaccggaccgggcaaccgtccgctgaag
tcgttgagcgacctgctcaagggcaagcagggccggttccgtcagaacctgctcggcaag
cgtgtcgactactcgggccgttcggtgatcgtggtcgggccgcagctcaagctgcaccag
tgcggtctgcccaagctgatggcactcgagctgttcaagccgttcgtgatgaagcgactg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcggatggtggagcggcagcgc
ccccaggtgtgggacgtcctggaagaggtcatcgccgagcacccggtgctgctcaaccgt
gcacccacgctgcaccgcctgggcatccaggccttcgagccgcagctggtggagggcaag
gccattcagctgcacccgctggtgtgtgaggccttcaacgccgacttcgacggtgaccag
atggccgtgcacctgccgctgagtgccgaggcgcaggccgaggcccgcatcctgatgctg
tcgagcaacaacatcctgtcgccggcctcgggtcgtccgctggccatgccgcgactggac
atggttaccgggctgtactacctgaccaccgagatcgagggtgagacaggcgaatacacc
ccggctgccaaggaccgtccggaggccggcgtgtactcctcgccggccgaggcgatcatg
gccgtcgaccgtggtgcgttgagcgtgcgggccaagatcaaggtgcgtctggaccagctg
cggccgccggccgaggtggagaccgagctgttcggcgagaacggctggcgtccgggcggt
gcctggatcgccgagaccacgctgggccgggtgctgttcaacgagctgctgccgaccggg
tacccgttcgtgaacaagcagatgcacaagaaggttcaggccgtcatcatcaacgacctg
gccgagcgctacccgatgatcgtggtcgcccagaccgtcgacaagctcaaggacgccggc
ttctactgggccacgcgttcgggggtcacggtctcgatggccgacgtgctggtgccgccg
cgtaagaaggagatcctcgactcctacgaagcgcgtgccgacaaggtcgaaaagcagttc
cagcgtggtgctctcaaccacgacgagcgcaacgaggcgctggtggagatctggaaggaa
gccaccgaggaagtgggtcaggcgctgcgtgaccactacccggccgacaacccgatcatc
acgatcgtcgactccggtgcgacgggtaacttcacccagacccggacgttggccggcatg
aagggtctggtgaccaaccccaagggtgagttcatcccgcggccgatcaagtcctccttc
cgtgagggactgacggtgctggagtacttcatcaacacccacggcgcccgaaagggcttg
gcggacaccgcgttgcgtaccgctgactcgggttacctgactcgtcgtctggtggacgtg
tcccaggacgtgatcgtgcgcgagcacgactgcggcaccgagcgcgggatcatcgtcgac
ttggccgagcctcaggcggacgggtcgctgatccgcaacccgttcatcgagacctcggcg
tacgcccgcaccttggccatggacgctgccgacagcaacggcaaggtcgttgtcgagcgg
ggccacgacctgggcgacccgtcgatcgaggcgctgctggcggccggtatctcgcaggtg
aaggtccgctcggtgctgacctgcaccaccggaaccggggtgtgtgccacctgctacggc
cggtcgatggccaccggcaagctggtcgacatcggtgaggcggtcggcatcgtcgccgcc
cagtccatcggtgagcccggtactcagctgaccatgcgcaccttccaccagggtggtgtc
ggtgaggacatcaccggtggtctgccgcgtgtgcaggagctgttcgaggcccggattccg
cgtggcaaggcgcccatcgccgatgtcgccggacgggtgcagcttgaagagggcgagaag
ttctacaagatcacgatcgtgccggacgacggtggcgaggaagtggtctacgacaagctg
cccaagcgtcagcggctgcgcgtgttcaagcacgaggacggctcggagcggttgctgtcc
gacggcgaccacgtcgaggtcggccagcagctcatggagggctcggccgacccgcacgag
gtgctgcgggtgcagggcccccgtgaggtgcagatccacctggtcaacgaggtccagcag
gtctaccgggcccagggtgtgtcgatccacgacaagcacatcgaggtgatcgtccggcag
atgctgcgccgcgtcaccatcatcgactcgggcgccacggagttcctgcccggttcgttg
accgagcgggccgagttcgagaccgagaaccgtcgcgtggtggccgagggcggcgagccc
gcggctggccgtccggtgctgatgggtatcaccaaggcgtcgctggccaccgactcgtgg
ctgtcggcggcttccttccaggagaccacccgcgtgctgaccgatgcggcgatcaactgc
cgcagcgacaagctgcagggcctgaaggagaacgtgatcatcggcaagctgatcccggcc
ggcaccggcatcaaccggtaccgcaacatcacggtgcagcccaccgaagaggcccgggcc
gctgcgtacacgatcccgtcctacgaggatcagtactacagcccggacttcggcgccgcc
accggtgccgcggttccgctggacgactacgggtacagcgactaccggtag
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