Mycolicibacter heraklionensis: K3U94_04855
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Entry
K3U94_04855 CDS
T07612
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mher
Mycolicibacter heraklionensis
Pathway
mher03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mher00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K3U94_04855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mher03400
]
K3U94_04855
Enzymes [BR:
mher01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
K3U94_04855
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K3U94_04855
DNA repair and recombination proteins [BR:
mher03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K3U94_04855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Ribosomal_S13
NFACT_N
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
QZA08626
UniProt:
A0A9X7WI97
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All DBs
Position
1016591..1017454
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AA seq
287 aa
AA seq
DB search
MPELPEVEALADHLRRHAVGCTIGRIDVAALSVLKTFDPPPTALHGQQVTGAHRWGKYLG
LQAGELFLIAHLSRAGWLRWSDQLAAAPLRPGKGPIALRVHLGVPGQAPGFDLTEAGTQK
RLAVWLVDDPAKVPGIATLGPDALAINADELAGLLAGNTGRIKNVLTDQKVIAGIGNAYS
DEILHTARLSPFATAGKLSADQLTALHEAMHAVLTDAVTRSVGQQAATLKGEKRSGLRVH
ARTGLPCPVCADTVREISFADKSFQYCPTCQTGGKVLADRRMSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctgcccgaggtcgaagcactcgccgatcatctgcgtcggcacgccgtcggt
tgcaccatcggccggatcgacgtggcggcgctgtcggtgctcaagactttcgacccgccg
ccgacggcgttgcacggccagcaggtgaccggcgcgcaccgctggggcaagtatctgggg
ttgcaggccggtgagctgtttttgatcgcgcatctgtccagggcgggctggctgcgctgg
tcggatcagctggcggccgcgccactgcgaccgggtaagggcccgatcgcgctgcgggtg
cacttgggcgtcccggggcaggctcccggcttcgacctgaccgaagccggcacccagaaa
cggctggcggtctggttggtcgacgatccggcgaaggtgccgggcatcgccacactgggg
ccggatgcgctggcgatcaatgccgatgagctggccggactgctggccggcaataccggc
cggatcaaaaacgtcctgaccgatcagaaggtgatcgccggaatcggcaacgcctacagc
gacgagatcctgcacaccgcgcgattgtcgccgttcgccaccgccggcaaattgtcggca
gatcagctgaccgcactgcacgaagccatgcacgccgtgctgaccgacgccgtcacccgc
tcggtcggccaacaggccgccaccttgaagggagagaagcgttccggtctgcgcgtacac
gcccgaaccggtctgccgtgcccggtgtgcgctgacactgttcgggaaatatctttcgcc
gataagtcatttcagtactgcccgacctgccagaccggcggcaaggtgctggccgaccga
cggatgtcgcgactgctcaagtaa
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