Mycolicibacter heraklionensis: K3U94_06755
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Entry
K3U94_06755 CDS
T07612
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mher
Mycolicibacter heraklionensis
Pathway
mher03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mher00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K3U94_06755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mher03019
]
K3U94_06755
03009 Ribosome biogenesis [BR:
mher03009
]
K3U94_06755
Enzymes [BR:
mher01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K3U94_06755
Messenger RNA biogenesis [BR:
mher03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K3U94_06755
Ribosome biogenesis [BR:
mher03009
]
Prokaryotic type
rRNA helicases
K3U94_06755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
CMS1
HEM4
adh_short
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
QZA08967
UniProt:
A0A9X7WJT8
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All DBs
Position
1415072..1416820
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AA seq
582 aa
AA seq
DB search
MTSTDVPAEPFPDPPAPSIADDTPTFADLQIHPSVLKAVADVGYETPSAIQAATIPALLE
GSDVVGLAQTGTGKTAAFAIPILSRIDTTSKATQALVLAPTRELALQVAEAFGRYGAHLP
RINVLPIYGGASYTVQLSGLKRGAQVVVGTPGRVIDHLERGSLDLSHLDYLVLDEADEML
QMGFAEDVERILADTPEYKQVALFSATMPSAIRRITSRYLHDPVEVTVKAKTTTAENISQ
RYIEVAGPRKMDALTRVLEVEPFEAMIVFVRTKQATEEVAEKLRARGFSAAAINGDIAQA
QRERTITALKNGNIDILVATDVAARGLDVERISHVVNYDIPNDPEAYVHRIGRTGRAGRS
GTALLFVNPRERHLLRLIEKVTRQKLVEAELPSVDDVNAQRVAKFADAITNHLSASGIEL
FRRLVEDYSREHNVPMADIAAALALQSRDGEAFLMVEPPPDKRRERVKDRDGGRDDRKGD
RKGPPKEGFATYRIAVGKRHKVNPGAIVGALANEGGLNRSDFGNISIKVDHSLVELPAKL
SGKTLKALEQTRIQGQLINLRRERPSGKPERRGEGGYRKRTE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgactgatgtgcccgctgagccgttcccggacccacccgccccgtccatcgcg
gacgacaccccgacattcgccgacctgcagatccacccttcggtgctcaaggccgtcgcc
gacgtcggctacgagacgccctcggcgatccaggccgccaccatcccggccctgctggag
ggttccgacgtggtcgggctggcccagaccggcaccggcaagaccgccgcgttcgccatt
ccgatcctgtcgcgcatcgacaccaccagcaaagccacccaggcgctggtgctcgcgccc
acccgcgagttggcgctgcaggtcgccgaggcgttcgggcgctacggcgcgcatctgccc
cggatcaacgtgctgccgatctacggcggcgcgtcctacacggtgcagctgtccgggctc
aagcgcggcgcgcaagtggtggtcggtacgccgggccgggtcatcgaccacctggaacgc
ggcagcctggacttgtcgcacctggactacctggtgctcgacgaggccgacgagatgctg
cagatgggtttcgccgaggacgtcgagcgcatcctggccgacacccccgagtacaagcag
gtggccctgttctcggcgaccatgccctcggccattcgtcgtatcaccagccgctacctg
cacgaccccgtcgaagtcaccgtcaaggcgaaaaccaccacggcggagaacatctcccag
cgctacatcgaagtcgccgggccgcgcaagatggacgccctgacccgggtgctcgaagtc
gagcccttcgaagcgatgatcgtcttcgtccgcaccaagcaggccaccgaggaggtcgcc
gaaaagctgcgcgctcgagggttttccgcggcggcgatcaacggtgacatcgcgcaggcg
cagcgggaacggaccatcaccgcactgaagaacggcaacatcgacatcctggtcgccacc
gatgtcgccgcccgtggactggacgtggagcgcatctcccacgtcgtcaactacgacatt
cccaacgaccccgaggcctatgtgcaccggatcgggcgcaccgggcgggccgggcgctcg
ggaaccgcgctgctgttcgtcaacccgcgggaacgccacctgctgcggctgatcgagaag
gtgacgcggcagaagctggtcgaggccgagctgcccagcgtcgatgacgtcaacgctcag
cgggtcgccaagttcgccgacgcgatcaccaaccatctcagtgcgtcgggcatcgagctg
ttccgtcgcctggtcgaggactacagccgcgagcacaacgtgccgatggctgacatcgcc
gccgcgctggcgctgcagtcccgagacggtgaggcgttcctgatggtggagccgccgccg
gacaagcgacgtgaacgcgtcaaggatcgcgacggcggccgggacgaccgcaaaggcgac
cgcaagggccccccgaaggaagggtttgccacctaccggatcgcggtcggcaagcgccac
aaggtcaacccgggtgcgatcgtcggggcgctggccaacgagggcggcttgaatcgcagc
gacttcggcaacatcagcatcaaggtggaccactcgctggtcgagctgcccgccaaactg
tccggcaagacgctcaaggcgttggagcagacccggattcagggccagctgatcaacctg
cgtcgtgagcggccgtctggtaaacccgaacgtcgcggcgagggtgggtaccggaaacgg
accgaatga
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