KEGG   Mycolicibacter heraklionensis: K3U94_13840
Entry
K3U94_13840       CDS       T07612                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
mher  Mycolicibacter heraklionensis
Brite
KEGG Orthology (KO) [BR:mher00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    K3U94_13840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mher03021]
    K3U94_13840
Transcription machinery [BR:mher03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     K3U94_13840
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HTH_20 ARM_KDM8_N
Other DBs
NCBI-ProteinID: QZA06137
UniProt: A0A9X7WDY9
LinkDB
Position
2949558..2951075
AA seq 505 aa
MAASKAQPATEEPKKGSATKAPAKAAVKSPAKAPAKSAAAAPAKRTAAKATKAAAPAKKA
TKSTARGAGADGEAKPATRSTRGPAKKAAKATKAGAKNADADLAPEDLDTDVELDGEPGV
DDIDEADLSLDELDDDTEAAADGDDTAATAPADSADEGEEGDDDEITEPSEKDKASGDFV
WDEEESEALRQARKDAELTASADSVRAYLKQIGKVALLNAEEEVELAKRIEAGLFATQKM
AEHAEKGDKLAVAYRRDMAWICRDGDRAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQE
GNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQ
RELLQDLGREPTPEELAREMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSE
AVVAVDAVSFTLLQDQLQSVLETLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERI
RQIESKTMSKLRHPSRSQVLRDYLD
NT seq 1518 nt   +upstreamnt  +downstreamnt
gtggcagcgagcaaggcacagccggcgactgaggagcccaagaagggcagcgccaccaag
gcgcccgccaaagccgccgtgaagtcgcctgccaaggctcccgccaagtctgccgctgca
gcacccgccaagcggaccgcggccaaggccaccaaggcagcagcgcccgccaagaaggcc
accaagtcgacggcgcgcggcgccggcgccgacggcgaggccaagcccgcgacccggtcg
acccggggcccggcgaagaaggccgccaaagccaccaaggcaggcgcgaagaacgccgat
gccgacttggcgcccgaggatctcgacaccgatgtcgagctggacggcgagcccggtgtg
gacgacatcgacgaggccgacctgagcctggacgaactcgacgacgacaccgaggcggct
gccgacggcgacgacaccgcggcgaccgcgcccgccgactcggccgacgagggcgaggaa
ggcgacgacgacgagatcaccgagcccagcgagaaggacaaggcctcaggcgacttcgtc
tgggacgaagaggagtccgaagcgctgcggcaggcccgcaaggacgccgagctcaccgcg
tcggccgactcggtccgcgcctacctcaagcagatcggcaaggtggcgctgctcaacgcc
gaagaggaagtcgagctggccaagcggatcgaagccggcctgttcgccacgcagaagatg
gccgagcacgccgaaaagggcgacaagctggcggtcgcctaccggcgtgacatggcatgg
atctgtcgggacggcgatcgcgccaagaatcacctgctcgaagccaacctgcgcttggtg
gtgtcgctggccaagcgctataccggccgcggaatggctttcctggacctgatccaggag
ggcaacctcggtctgatccgcgcggtggagaagttcgactacaccaagggctacaagttc
tccacctacgccacctggtggatccgccaggcgatcacccgggccatggccgaccaggca
cgcaccatccgcatcccggtccacatggtcgaggtgatcaacaagctcggccgcatccaa
cgcgagctgctgcaggacctgggccgcgagcccacccccgaggaattggcccgggagatg
gacatcaccccggagaaggtgctggagatccagcagtatgcccgcgagcccatctcgctg
gaccagaccatcggcgacgagggcgactcgcagctgggcgacttcatcgaagacagtgag
gccgtggtcgccgtcgacgcggtctcgttcaccctgctccaggaccaactgcagtcggtg
ctcgagacgctctccgagcgcgaggccggtgtggtgcggctgcggttcggcctcaccgac
ggccagccgcgcaccctcgacgagatcggtcaggtctacggcgtcacccgggagcgcatc
cgtcagatcgagtcgaagacgatgtcgaaactccggcaccccagccggtctcaggtcctg
cgcgactacctcgactag

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