Mycolicibacter heraklionensis: K3U94_16620
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Entry
K3U94_16620 CDS
T07612
Name
(GenBank) DEAD/DEAH box helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mher
Mycolicibacter heraklionensis
Pathway
mher03420
Nucleotide excision repair
mher03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mher00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K3U94_16620
03430 Mismatch repair
K3U94_16620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mher03400
]
K3U94_16620
Enzymes [BR:
mher01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K3U94_16620
DNA repair and recombination proteins [BR:
mher03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K3U94_16620
MMR (mismatch excision repair)
Other MMR factors
K3U94_16620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QZA06613
UniProt:
A0A9X7WE89
LinkDB
All DBs
Position
complement(3508451..3511747)
Genome browser
AA seq
1098 aa
AA seq
DB search
MTNRYDPAELAAALGLHQPTEEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGY
AEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGAGLMPAEPAADAAPTAPTVSTYHAFAGA
LLREHGLLLGIEPDTRLLTETGLWQLAFDVVSSYPGELHTDRDPAAVTAMVLRLAGQLAE
HLVDTDALRHTHLELERLVHTLPPGPRQRAEPNQSLLKMLDTQTERAELVPLIEALHQRM
RAERAMDFGAQMATAARLAQAGEAVGARLRATYRVVLLDEYQDTGHAQRIALSSLFGGGA
DDGLALTAVGDPIQSIYGWRGASATNLPRFATDFPLSDGTPAPTLELRTSWRNPPEVLHL
ANEISAEARRRSVTVRSLRPRPAAPPGDVRVALLPDVVAEDEWVAEALQRCYRQADADGV
APPTAAVLVRRNADAAPLAEAIRARGVPVEVVGLAGLLSVPEVADLVAMLRLIQEPTAGA
AAMRVLTGPRWRLGAADLAALWRRAAELSRPEQSTAPVSAAEIAAAAGPDSDTACLADAL
ADPGPAERYSAIGYRRIVALAEELTLLRGHLWHPLPDLVAEVRRVLGLDCEVLAAQPVAA
SAAGTEQLDAFADVVAGYAEGAGAQSALPGLLAYLDAATVVENGLAPAAPTVAADRVQIL
TVHAAKGLEWQVVAIPHLVARVFPSTASRRSWLSDAAELPPLLRGDRAQLDGGEATLGPP
HGPGDHGVPLLDTDAVTNRKQLSDAISEHQRRLEQRRVDEERRLLYVAVTRAEDTLLVSG
HHWGLGGEAKPRGPSDFLTEIKAVIDTAADAGTPCGVVEHWAPEPADGDRNPLCDKVNEA
TWPVDPLAGRRGDVERGAALVAAELQAGEPQDGSSSASPWAADVDALLAERATAATQRAR
ILPNQLSVSGLVELSRDPDGAGQRLSCRLPARPDPHALLGTAFHDWVQRLYGAERLFELE
DLPGAADADTARADAQELARLQAAFLDSPWAARTPIAVEVPFEMAIGTRVVRGRIDAVFA
EPDGGVTVVDWKTGAAPDGPEARRHAAVQLGVYRLAWAALTGCLESQVRAAFHYVRSGTT
VVADQLPELAELAALLNS
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaccgctacgaccccgccgaactggcggccgcgctcgggttgcatcagcccacc
gaggagcaggccgcggtcatcgccgcaccgccgggaccgctggtggtgatcgccggcgcg
ggtgccggcaagaccgagacgatggcggcccgggtggtgtggctggttgccaacggctac
gccgaacccggccaggtattgggcctgaccttcacccgcaaggcggccggccaactgctg
cgccgggttcgatcccggttggcgcggttggccggtgccggactgatgccggccgaaccc
gcggccgacgccgccccgacggcgcccaccgtcagcacctatcacgccttcgccggcgcg
ctgctgcgcgagcacgggctgctgctcggcatcgagccggacacccggctgctcaccgag
accgggctgtggcagctggcgttcgacgtggtcagcagttatccgggggaactgcacacc
gaccgggatcccgccgcggtcaccgcgatggtgttgcggctggccgggcagctggccgaa
cacctggtggacaccgacgcactgcgccacacccacctggagttggagcggctggtgcac
accctgccgccgggcccgcgccagcgcgccgaacccaaccagtcgctgctcaagatgctg
gacacccagaccgaacgcgccgaactggtgccgctgattgaggccctgcaccagcggatg
cgggcggaacgggcaatggatttcggcgcacagatggcgactgccgctcggctggctcag
gcaggcgaggccgtcggcgcccggttgcgcgccacctaccgggtggtgctgctcgatgaa
tatcaggacaccgggcatgcccagcgcatcgccctgtcgtcgctgttcgggggcggcgcc
gacgacggcctggcgctgacggcggtgggtgacccgatccagtcgatctacggctggcgc
ggcgcctcggcgaccaacctgccccgcttcgccaccgactttccgctctccgacggcaca
ccagcgcccaccctggagctgcggaccagctggcgcaacccgcccgaagtgctgcacctg
gccaatgagatctccgcggaggcgcgccggcgctccgtcacggtgcgatcgctgcggccg
cgcccggccgcgccccccggcgacgtgcgggtcgcgctgctgcccgacgtcgtcgccgaa
gacgagtgggtggccgaggcattgcagcggtgctaccggcaagccgacgccgacggggtg
gccccgcccactgccgcggtgctggtgcggcgcaacgccgacgccgcgcccctggccgag
gcgatccgcgcccgcggtgtgccggtggaagtagtggggctggccgggctgctgtccgtg
ccggaggtggccgacctggtggcgatgctgcggctgatccaagagccgaccgccggcgcc
gcggcgatgcgcgtgctgaccggaccgcgatggcggctcggcgccgcagacctggccgcg
ctgtggcggcgcgccgccgagctgtcccggcccgaacagtcgaccgcgccggtctctgcc
gcggagatcgccgccgcggccgggcccgattccgacaccgcatgtctggccgacgcgctc
gccgatcccggaccggcagagcgctattcggccatcgggtaccggcgcatcgtcgccctc
gccgaggaactgaccctgctgcgcggccacctgtggcatccactgcctgacctggttgcc
gaggtacgccgcgtgctcggcctggactgcgaggtgcttgccgcccagccggtggcggcc
agtgcggccggcaccgaacaactcgacgccttcgccgatgtggtggccggatacgccgag
ggagccggggcccagtccgcactgccgggcctgttggcctacctggatgccgccacggtg
gtggagaacgggctggcgccggccgcgccgacggtcgctgccgaccgcgtccagattctc
accgtgcacgccgccaagggactggaatggcaggtggtcgcgataccgcacctggtggcg
cgggttttcccgtcgaccgcatcgcgacgcagctggctgtccgacgccgctgaactgccg
ccgctgctgcgcggcgaccgggcccaactcgacggaggagaggcgacgctgggaccgccg
catgggccgggcgatcacggcgtcccactgctcgacaccgacgcggtcaccaaccgaaag
cagctgtccgacgccatctccgaacatcagcgccgcctagagcagcggcgggtcgacgaa
gagcgccggctgctctatgtcgctgtcacccgcgccgaggacaccctgctggtctctggc
caccactgggggctggggggcgaggccaagcctcgcggtccgtcggatttcctcaccgaa
atcaaggcggtgatcgacaccgcggccgacgcggggacgccctgcggggtggtcgagcac
tgggcgccggagccggccgacggagatagaaacccgttgtgcgacaaggtaaacgaagca
acatggccggttgacccgctggccggccggcgcggcgatgtcgaacggggcgcggcgctg
gttgccgcggagctacaggcgggcgagccgcaggacggatcgtcctcggccagcccgtgg
gcggctgatgtcgatgcgctactcgcagagcgcgccacagccgcgacgcagcgggcccgc
attctgcccaaccagctctcggtgagcggcctggtcgagctgagccgtgaccccgacggt
gctgggcagcgtctgagttgccgactcccggcccggcccgacccgcatgcgctgttgggc
accgcatttcacgactgggttcagcggctctatggggccgagcggcttttcgagctcgaa
gacctgcccggtgcggccgatgccgacacagcccgcgccgacgcccaggagctggcccgt
ctgcaggcggcgttcctggattcaccgtgggccgcccgcacccccatcgccgtcgaggtg
ccgttcgagatggccatcggcacccgggtggtgcgtggccggatcgacgcggtgttcgcc
gagccggacggtggcgtcaccgtggtggactggaagaccggtgcggcgcccgacggaccc
gaggcgcgccggcacgccgccgtccagctcggcgtttaccggttggcctgggccgcgttg
accggctgcctggaatcgcaggtgcgagccgccttccactacgtgcgttccgggaccacc
gtcgtcgccgatcaactgcccgaactggctgagctggccgcgctgctcaacagctga
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