Mycolicibacter heraklionensis: K3U94_20770
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Entry
K3U94_20770 CDS
T07612
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mher
Mycolicibacter heraklionensis
Pathway
mher03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mher00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K3U94_20770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mher03019
]
K3U94_20770
03400 DNA repair and recombination proteins [BR:
mher03400
]
K3U94_20770
Enzymes [BR:
mher01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K3U94_20770
Messenger RNA biogenesis [BR:
mher03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K3U94_20770
DNA repair and recombination proteins [BR:
mher03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K3U94_20770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
AAA_22
DprA_WH
Motif
Other DBs
NCBI-ProteinID:
QZA07349
UniProt:
A0A9X7WH90
LinkDB
All DBs
Position
complement(4367529..4369613)
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AA seq
694 aa
AA seq
DB search
MSSTRADAQAILEQLAGPQALLRDDQWTAIEALVVGRRRALVVQRTGWGKSAVYFIAAKL
LRAGGHGPTVIVSPLLALMRNQVAAAERAGVHAATINSSNVTEWVDVQRRVTAGELDVLL
VSPERLNNPDFRDEVLPALAARAGLVVVDEAHCVSDWGHDFRPDYRRIRTLIAELGADIP
VLATTATANDRVVADVAGQLGVGGGDTLVLRGGLDRESLRMSVVAAGGPAQRAAWIGAHL
QQLPGSGIVYTLTVAQAHDVAADLRAQGFAVAAYTGSTDAADREQLEADLLANRVKALIA
TSALGMGFDKPDLGFVVHLGAPSSPIAYYQQVGRAGRATASAEVILLPGTEDQDIWRYFA
SLAFPAESLVRKVIGELSPDQPLSTPALEARVDLNRSRLEMVLKVLDVDGAVRRVKGGWL
GTGAQWSYDEQRYRKLDELRRAEQQAMLDYQATDGCRMSFLRAQLNDPELQAGERCGRCD
NCAGARFDAAVDPAAAAATRERLMRPGVEITPRRQWPSGLAQLGVELSGRITDGPEPGRV
IGRLTDLGWGGRLRRLLDEPDGEVPEEVVRAAVSVLAGWEWRQRPTAVLGLDSATHPVLI
GSLTDRLAELGRLTRLDTLRYAPGRRAATAANSAYRVAALQGCWLPPAELPADIGPVLLV
DDVTDTGWTLTMAARVLRAAGAPQVLPFALASTN
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
gtgagctcgacgcgcgccgacgcccaggcgattctggaacagctggccggaccgcaggcg
ctgctgcgcgacgaccagtggaccgcgatcgaggcgctggttgttgggcgccgccgcgca
ctggtggtgcagcgcaccggctggggcaagtctgcggtgtacttcatcgcggcgaagctg
ctgcgtgcgggcgggcacggtccgacggtgatcgtctcgccgctgctggcgttgatgcgc
aaccaggtcgcggccgcggagcgggccggcgtgcacgcggccaccatcaactcgtccaac
gtgaccgagtgggtcgacgtgcaacgccgggtgaccgcgggcgagctggacgtgctgctg
gtcagcccggagcggctcaataaccccgacttccgcgatgaggtgctgccggcgctggcg
gcccgggccgggctggtcgtggtcgacgaggcgcactgcgtgtcggactgggggcatgat
ttccggccggactaccggcgtatccgcaccctgatcgccgagctcggcgccgacatcccg
gtcctggcgaccacggcgaccgccaatgaccgggtggtcgccgatgtcgccggccagctc
ggggtcggcggtggcgacaccctggtgctgcgcggtggcctggaccgcgagtcgttgcgg
atgtcggtggtggccgccggcggtccggcgcagcgggccgcctggatcggcgcgcacctt
cagcagctgcccggctccggcatcgtctacacgctcaccgtggcccaagcccacgatgtg
gccgccgacctgcgtgctcaggggttcgcggtggccgcctacaccggttcgaccgacgcg
gccgatcgcgagcaactcgaggccgatctgctggccaatcgggtcaaagcgctgatcgcc
acgtcggcgctgggcatgggattcgacaagccagacctgggattcgtcgtgcacctgggt
gcgccgtcctccccgatcgcctactaccagcaggtcggtcgggccgggcgcgccaccgcc
agcgccgaggtgatcctgctgcccggcaccgaggaccaagacatctggcgctacttcgca
tcactggccttccccgcggagtccttggtgcgcaaggtgatcggcgaactgtcgcccgat
cagccgctgtcgacaccggcgctggaagcccgggtcgacctgaaccggtcgcggttggag
atggtgctcaaggtcctcgacgtcgacggcgcggtgcgccgagtcaagggcggatggctg
ggcaccggagcccagtggagctacgacgagcagcgttaccgcaaactcgatgagctgcgc
cgggccgagcagcaggcgatgctggactaccaggccacggacggctgccggatgagtttc
ctgcgtgcccagctcaatgaccccgagctgcaggcgggggagcgttgcgggcggtgcgac
aactgcgccggggcgcggtttgacgccgcggtggatcccgccgctgccgcggccacccgg
gagcggctgatgcgtcccggcgtggagatcacgccgcggcggcagtggccgtcgggcctg
gcgcagctcggcgtcgaactgtccggccggatcaccgacgggccggagccgggccgggtc
atcggccggctcaccgatctgggctggggcgggcggctgcggcggctgctcgacgagccg
gacggcgaggtgcccgaggaggtggtgcgcgcggccgtgagtgtgctggccggctgggag
tggcggcagcggccgaccgcggtgctgggcctggattcggcgacgcacccggtgttgatc
ggttcgctgaccgaccggctggccgagctgggccgtctgacccgcttggacaccttgcgg
tacgcgcctgggcggagggcggcgaccgccgcgaactccgcctaccgggtcgccgccctg
cagggttgctggctgccgccggcggaactaccggcggatatcggcccggtgctgttggtc
gacgacgtgaccgacaccgggtggacgctgacgatggcggcccgggtgttgcgtgctgcc
ggtgcgccgcaggtcctgccgttcgccctggccagcacgaactga
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