Mycolicibacterium helvum: MHEL_54460
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Entry
MHEL_54460 CDS
T07064
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
mhev
Mycolicibacterium helvum
Brite
KEGG Orthology (KO) [BR:
mhev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhev03021
]
MHEL_54460
Transcription machinery [BR:
mhev03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MHEL_54460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_Crp_2
HTH_23
MarR
HTH_3
MarR_2
KORA
HTH_24
HTH_31
DUF7343
Sigma70_ECF
HTH_10
HTH_Tnp_ISL3
DUF134
Motif
Other DBs
NCBI-ProteinID:
BBY67203
UniProt:
A0A7I7TEQ9
LinkDB
All DBs
Position
complement(5768375..5769292)
Genome browser
AA seq
305 aa
AA seq
DB search
MSEPAAERESEYADVLAMFRLLATLDPDSAAFQRQRDAIIARCLPLADHIARRFANRGEP
LEDLVQVARVGLVQAVKRFDVEAGSDFLSFAIPTMMGEVRRYFRDHSWSLKVPRRLKDLT
VQLNRGRSELSQTLGRAPTATELAAHLGMDRQEIVDGLVAASAYATQSTDVPVRAEDGQQ
ALSERLGTVDVNIERVLDVETVRPLLAALPERERTVLVLRFFESMTQSQIADQIGVSQMH
VSRILTRAIAGIRQRVQDAEAVSPTLPISHRRAVMASRDLPRPNATAEKARRPGEPTASE
PGAVA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcccgccgccgaacgcgagtctgaatacgccgacgttctggcgatgttccgc
ctcctggcgacattggacccggactcagcggcattccaacggcaacgcgacgccatcatt
gcacgatgtctgccgttggccgaccacatcgctcgtcgcttcgccaaccgcggtgagcca
ctcgaggacctcgtccaagtggcacgcgtcggacttgtgcaggcagtgaagcggttcgat
gtcgaggcaggctcggatttcctgtcgttcgcgatccccaccatgatgggggaggtacgc
agatacttccgcgatcacagttggtcgttgaaggtgccgcggcgactcaaagacctgacc
gtgcaacttaatcggggcagatcagaactctcccagacgctcggacgggcgccgacagcc
accgaactcgccgcgcacctcgggatggaccgccaagagatcgttgacggtctggtcgct
gcaagcgcctatgccacccaatccaccgatgttcccgtgcgggccgaggatggccagcag
gcattgagcgaacgattggggactgtcgatgtgaatatcgagagggtcctggacgtggag
acggtccgtccgctgctggcggcattgccggaacgcgaacgaactgtgttggtgctgcgg
ttctttgagagcatgacgcagtcgcagatcgccgatcagattggtgtttcgcagatgcat
gtctcccggatcttgacccgggcgatcgcgggcatccggcagcgggtgcaggatgcggag
gcagtgtcgcccacgctgccgatctcacaccgccgggcggtgatggcgtcaagggatctt
cctcgcccgaacgcgacagcagaaaaggctcgcaggccaggggagcccacggcaagcgag
cccggcgccgtcgcatag
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