Mycolicibacterium helvum: MHEL_56840
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Entry
MHEL_56840 CDS
T07064
Symbol
dnaE1
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mhev
Mycolicibacterium helvum
Pathway
mhev03030
DNA replication
mhev03430
Mismatch repair
mhev03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MHEL_56840 (dnaE1)
03430 Mismatch repair
MHEL_56840 (dnaE1)
03440 Homologous recombination
MHEL_56840 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhev03032
]
MHEL_56840 (dnaE1)
03400 DNA repair and recombination proteins [BR:
mhev03400
]
MHEL_56840 (dnaE1)
Enzymes [BR:
mhev01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MHEL_56840 (dnaE1)
DNA replication proteins [BR:
mhev03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MHEL_56840 (dnaE1)
DNA repair and recombination proteins [BR:
mhev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MHEL_56840 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
BBY67441
UniProt:
A0A7I7TFU4
LinkDB
All DBs
Position
complement(6019736..6023260)
Genome browser
AA seq
1174 aa
AA seq
DB search
MHLHNHTEYSMLDGAAKITPMLAEAQRLEMTAIGMTDHGNMFGASEFYNAATKVGIKPII
GVEAYIAPGSRFDTRRILWGDPGQKSDDVSGSGSYTHMTMVAENATGLRNLFKLSTLASF
EGQLGKWSRMDAEIIAEHASGIIATTGCPSGEVQTRLRLGHEKEALESAAKWREIFGAEN
YFLELMDHGLSIERRVREGLLDVGRKLGIPALATNDCHYVTRDASHNHEALLCIQTGKTL
SDPNRFKFDGDGYFLKSAAEMRALWDAEVPEACDSTLLIGERVQSYADVWAPADRMPIFP
VPDGHDQGSWLRHEVDAGLRRRFPDVVPPEYTERASYEIDVICGKGFPSYFLIVADLINY
ARSIDIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPDIDIDFDDRR
RGEMVRYAAEKWGSDRVAQVITFGTIKTKAALKDSARVHYGQPGFAIADRITKALPPPIM
AKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLVRNAGVHACAVIMS
SEPLIEAIPLWRRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDCIENIKANRGI
DLDLDALPFDDPKAYELLGRGDTLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLALYRPGP
MGMNAHNDYADRKNNRQPIKPIHPELEEPLKEILSETYGLIVYQEQIMFIAQKVASYSMG
KADALRKAMGKKKLEVLEAEYQGFKEGMTANGFSEKAVKALWDTILPFAGYAFNKSHAAG
YGLVSYWTAYLKANFPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPDVNESVQNF
ASVGNDIRFGLGAIRNVGANVVSSLIATRTEKGKFTDFSDYLNKIDIAPCNKKVTESLVK
AGAFDSLKHPRKGLFLVHTDAVDSVLGTKKAEAIGQFDLFGGGSDDGGTGDAAFTIRVPD
EEWDDKHKLALEREMLGLYVSGHPLDGVAHLLNAQVDTQIPAILAGDVANDTQVRVGGIL
AGVNRRVNKNGMPWASAQLEDLTGGIEVMFFPQTYSMFGAEIADDAVVLVGGKVRIQDDR
ISLIANELVVPDFSNAQVDRPVAVSLPTRQCTIDKVTALKQVLARHPGTSQVHLRLISGD
RITTLELDQSLRVTPSSALMGDLKALLGPGCLGG
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
gtgcatctgcacaaccacaccgagtactcgatgctcgacggggccgcgaagatcacgccc
atgctcgccgaggcgcagcgcctcgagatgaccgccatcggcatgaccgaccacggaaac
atgttcggggccagcgagttctacaacgcggccaccaaggtcggcatcaagccgattatc
ggtgtcgaggcgtacatcgcacccggttctcggttcgacacccgccgcatcctgtggggt
gatccgggccagaagagtgacgacgtgtcgggcagcggctcctatacccacatgacgatg
gtcgccgagaacgccaccggactgcgcaacctgttcaagctgtcgacgctggcctcgttc
gagggtcagctgggcaagtggtcgcggatggacgccgagatcatcgccgagcatgcctcg
ggcatcatcgccaccaccggctgcccatccggtgaggtgcagacccggttgcggctgggc
cacgagaaggaggcgctggagtcggccgccaagtggcgggagatcttcggcgcggagaac
tacttcctggaattgatggatcacgggctgtcgatcgagcgccgggtccgcgagggcctg
ctcgacgtcggtcgcaagctcggcattccagcgctggccaccaatgactgccactacgtg
acccgcgacgcctcgcacaaccacgaagcgctgctgtgcatccagaccggcaagacgctc
tcagaccccaaccggttcaagttcgacggcgatggctacttcctgaaatcggccgccgag
atgcgcgcgctgtgggacgccgaggtgccggaggcctgcgattcgacgctcctgatcggt
gagcgggtgcagtcctatgccgacgtgtgggccccggccgaccggatgccgatcttcccg
gtgccagacggacacgaccagggcagctggctgcgccacgaggtcgatgccggtttgcgg
cgccgttttccggatgtggtgccgccggagtacaccgaacgggccagctatgagatcgac
gtcatctgcggcaagggcttcccgtcgtacttcctgatcgtggccgacctgatcaactac
gcgcgctcgatcgatatccgggtgggccccggccgcggatctgccgccggctcgctggtg
gcctacgcgctcggcatcaccaatatcgacccgatcccgcacgggctgctgttcgagcgc
ttcctcaacccagaacgtccgtcggcacccgatatcgatatcgacttcgacgaccgccgt
cgcggtgagatggtgcgctacgccgccgagaagtggggcagtgaccgggttgcccaggtc
atcaccttcggcaccatcaagaccaaagcggcactgaaggattcggcgcgcgtccactac
gggcagccgggcttcgcgatcgccgaccggatcaccaaggcgctgccgccgccgatcatg
gccaaggacatcccgctgtcgggcatcaccgacccgaaccatgagcggtacaaggaggcc
gccgaggttcgcggcctgatcgacaccgatcccgacgtgcgcaccatctacgagaccgcg
cgcgggctggagggcctggtccgcaacgccggcgtgcacgcatgcgcggtgatcatgagt
tccgagccgctcatcgaggcgattccgctgtggcggcggccgcaggacggcgcgatcatc
accggctgggactatccgtcgtgtgaggccatcggcctgctgaagatggacttcctcggc
ctgcggaacctgacgatcatcggcgactgcatcgagaacatcaaagccaaccgcggtatc
gacctcgatctcgatgcgttgccgttcgatgaccccaaggcctacgaattgctggggcgc
ggcgacaccctgggggtgttccagctcgacggcggcccgatgcgagacctgctgcgccgc
atgcagcccaccgagttcaacgacatcgtcgcggtgctggcgttgtaccggccgggcccg
atgggcatgaacgcccacaacgactacgccgatcgcaagaacaaccggcagccgatcaag
ccgatccacccggagctcgaagagccgctcaaggagatcctctccgagacctacggactg
atcgtctaccaagagcagatcatgttcatcgcgcagaaggtcgcctcctactcgatgggc
aaggccgacgcgctgcgaaaagccatgggcaagaagaagcttgaggtcctggaagccgaa
taccagggcttcaaggaggggatgaccgccaacggcttctccgaaaaggccgtgaaagcg
ttgtgggacaccatcctgccgttcgccggctacgcgttcaacaaatcgcatgccgccggc
tatgggctggtgtcttactggaccgcctatctcaaggccaacttcccggccgagtacatg
gccgggttgctcacctcggtcggcgacgacaaggacaaggccgcggtctacctggcggac
tgccggcgcctcggcatcaccgtgctgccacccgacgtcaacgagtcggtgcagaacttc
gcctcggtgggtaacgacatccggttcgggctcggcgccatccgcaacgtcggcgccaac
gtggtcagctcgctgatcgccacccgcaccgagaaggggaagttcaccgacttctccgac
tatctgaacaagatcgatatcgcgccctgcaacaagaaggtcaccgaatctctggtcaag
gcaggggctttcgactcgctcaagcatccccgcaagggtctgttcctcgtccacaccgat
gccgtcgactccgtgctgggcaccaagaaggccgaggcgatcggccagttcgacttgttc
ggcggcggctcggatgacggtggtaccggcgatgcggcgttcaccatccgggttcccgac
gaggaatgggacgacaagcacaagctcgcgctcgagcgggaaatgctggggctgtatgtc
tccgggcacccgctcgacggagtggcacatttgctgaacgcccaggtcgacactcagatc
ccggctatcctcgccggcgacgtcgccaacgacacccaggtgcgggtcggcggtatcctg
gccggcgtcaaccggcgggtcaacaagaacggaatgccctgggcctcagcgcagctggaa
gacctcaccggtggtattgaggtgatgttcttcccgcagacctactcgatgttcggcgca
gagatcgccgacgacgccgtggtgctcgtcggcggcaaggttcgtatccaggacgaccgg
atttcgttgatcgccaatgagctggtggtacccgatttttcgaacgcgcaagttgaccgg
ccggtggcggtgagcctgcccacccggcagtgcaccatcgacaaggtcaccgcgcttaag
caggtgctggcccgccatcccggcacctcgcaggtgcacttgcggctgatcagtggcgat
cgcatcaccacactcgagctcgaccagtcgctgcgggtgacgccgtcctcggcgctgatg
ggcgatttgaaggcgctgttgggccctggctgcctaggcggctag
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