Methylocystis heyeri: H2LOC_001505
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Entry
H2LOC_001505 CDS
T06290
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mhey
Methylocystis heyeri
Brite
KEGG Orthology (KO) [BR:
mhey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mhey03009
]
H2LOC_001505 (rimO)
Enzymes [BR:
mhey01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
H2LOC_001505 (rimO)
Ribosome biogenesis [BR:
mhey03009
]
Prokaryotic type
ribosomal protein modification factors
H2LOC_001505 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
QGM44478
UniProt:
A0A6B8KD60
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Position
complement(350482..351849)
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AA seq
455 aa
AA seq
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MQDKPSHPSSENANAAAPRVSFVSLGCPKALVDSERIITRLRAEGYELSRSHAAADVVVV
NTCGFLDSAKEESLQAIGAALGENGKVVVTGCMGAEPGAIAEKFPQVLAITRPQDYESVL
EAVHRAAPPAHDPFQDLIPPQGVKLTPRHYAYLKISEGCDNSCSFCIIPHLRGPLVSRPA
AEVLREAEKLVAAGVKEILVISQDTSAYGRDLRYTESPFHDRAVRARFFDLAKELGELGA
WVRLHYVYPYPHVDEALTLMAEGKILPYLDIPFQHAAPSVLKAMKRPANEEKTLERIQSW
RRLVPDLALRSSFIVGFPGETEEDFAYLLDWLEAAQIDRAGAFKYEPVAGAPANDLGLPV
VPEEVKQSRWNRFMERQQAISARILKRKIGQRLQVIIDEAGGGAAGGMAKGRGKADAPEI
DGAVHVSSRRPLRAGDIVSVRIEGSDAYDLLGAAV
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataaacccagccacccctcgtccgaaaacgccaatgccgcggcgccgcgggtc
tctttcgtttcgctcgggtgccccaaggcgctcgtcgacagcgagcgcatcatcacccga
ctgcgcgcggaaggatatgagctctcgcgcagccatgccgccgcggatgtggtcgtggtc
aacacctgcggcttcctggacagcgccaaagaggaatcccttcaggcgatcggcgcggcg
ctgggcgaaaacggcaaggtggtcgtgaccggctgcatgggcgcggagcccggcgccatc
gcggagaaatttccccaggtgctcgcgataacccggccccaggactacgaaagcgtgctc
gaagccgtgcatcgcgcggcgccgccggcccatgacccgttccaggatctcattccgccg
cagggcgtcaagctgacccctcgccactacgcctatctcaagatttcggaaggctgcgac
aacagctgctccttctgcatcattccccatttgcgcgggccgctggtctcgcgccccgcg
gccgaggttctgcgcgaggcggaaaagctggtcgctgcgggcgtgaaggaaattctggtc
atctcgcaggacaccagcgcctatggccgcgatctgcgctacactgagagcccgtttcac
gaccgggccgtgcgggcgcgctttttcgatctcgccaaggaattgggcgaactcggcgcc
tgggtcaggctccattacgtctatccctatccccatgtcgacgaggcgctgacgctcatg
gccgagggcaagatcctgccctatctcgacattcccttccagcatgcggcgccttcggtg
ctgaaggcgatgaagcggcccgccaatgaggaaaaaactctggagcgcatccagagctgg
cgccgcctcgtcccggatctcgccctgcgctccagtttcatcgtcggcttccccggcgaa
accgaggaagacttcgcctatctgctcgactggctggaggcggcgcagatcgaccgcgcc
ggcgcattcaaatatgagcccgtcgcgggcgcgcccgccaatgatctcggtctccccgtc
gttcccgaggaggtgaagcagagccgctggaaccgcttcatggagcgccagcaggcgatc
agcgcaagaattctcaagcgcaagatcggacagaggctgcaggtcatcatcgacgaagcc
ggcggcggcgcggcgggcggaatggccaagggacgcggcaaggccgacgcgcccgaaatc
gacggcgccgttcatgtgtcgtcgcgccgccccttgcgcgcgggagacatcgtaagcgtc
aggatcgaaggatcggacgcctatgacctgttgggcgcggcggtgtga
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