Methylocystis heyeri: H2LOC_003025
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Entry
H2LOC_003025 CDS
T06290
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mhey
Methylocystis heyeri
Pathway
mhey03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mhey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H2LOC_003025 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhey03400
]
H2LOC_003025 (uvrB)
DNA repair and recombination proteins [BR:
mhey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H2LOC_003025 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H2LOC_003025 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
UB2H
AAA_30
SWI2_SNF2
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
QGM44743
UniProt:
A0A6B8KE86
LinkDB
All DBs
Position
699059..701635
Genome browser
AA seq
858 aa
AA seq
DB search
MTSSDKERPTGKKSSRSPVRATRAKAAKPELAPLEPHLAALLNPALAPAQGFEETPQAPY
DPGSVTGLDADDMRKYGLDGGVPKAGDAAPGGFGGVQATIDSLDQLLRLGDPNVRNKAAW
TPHRPERPQKSEGGVRFELVSDYKPCGDQPHAIDELVKGIEAQERDQVLLGVTGSGKTFT
MAQVIARTQRPALILAPNKTLAAQLYGEFKAFFPHNAVEYFVSYYDYYQPEAYVPRSDTY
IEKESSVNEQIDRMRHAATRALLERDDVIIVASVSCIYGIGSVETYTAMTFGITLREKIE
PRQLIADLVALQYRRVQADFTRGTFRVRGDTVDIFPAHYEDRAWRVSFFGDEVEGIYEFD
PLTGKKTVDLEFVKVYANSHYVTPRPTLLQSIKSIKEELRARLDELNRAGRIVESQRLEQ
RTRFDVEMMEATGACAGIENYSRYLTGRKPGEPPPTLFEYLPDNALVFADESHVSVPQIG
AMYKGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDAMRPQTVSVSATPGGWEMEQTGGVF
VEQVIRPTGLIDPPVDVRPARAQVDDLLHEAKATSQMGYRSLVTVLTKRMAEDLTEYLHE
NGVRVRYMHSDIDTIERIEIIRDLRLGAFDVLVGINLLREGLDIPECGLVAILDADKEGF
LRSETSLVQTIGRAARNVDGRVILYADHVTGSMQRAMDETNRRRAKQEAYNAEHGITPAS
IKRGIADILGSVAEEDHYTVDTGVDIAPGHNLAAVIAELEKKMREAAADLAFEEAARLRD
EIQRLQRAELLADAGPMKYLRAASGGASESSGTRARKPTDADMGPHNFGGGEARPLGRPL
PRSTMGKPGTRAVKGKSK
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgacctcatccgacaaagaacgcccgacgggcaagaaaagctcccgctccccggtgcgc
gcgacccgcgccaaagccgccaagcccgagcttgcgccgctggagccccatctcgcggct
ctgctcaatccggctctggcgccggcgcagggcttcgaggaaacgccgcaggcgccttac
gatcccggctcggtgaccggcctcgacgccgatgacatgcgcaaatatgggctcgacggc
ggggttccgaaagccggcgacgctgcgccgggcggcttcggcggcgtgcaggccaccatc
gacagtctggatcagctgttgcggctcggcgaccccaatgtccgcaacaaggccgcctgg
acgccgcaccggcccgagagaccacagaaatccgagggcggcgtccgctttgagctggtg
tcggactacaagccctgcggcgaccagccccacgccatcgacgaactcgttaaggggatc
gaggcgcaggagcgcgatcaggtgctgctcggcgtcaccggctccggcaagaccttcacc
atggcgcaggtgatcgcccgcacccagcggcctgcgctgatcctggcgcccaacaagacc
ctggcggcgcagctctatggcgagttcaaggcgttcttcccccacaacgccgtggaatat
ttcgtctcctattacgattattaccagcccgaggcctatgtgccgcgctcggacacttac
atcgagaaagaatcctcggtgaacgagcagatcgaccgcatgcgccacgccgcgacgcgc
gctttgctggagcgcgacgacgtcatcatcgtcgcctcggtgtcatgcatctacggcatc
ggctcggtggaaacctacaccgcgatgaccttcggaatcacgctgcgcgaaaagatcgaa
ccgcgccagctgatcgcggatctggtggctctgcagtaccgccgcgtgcaggccgatttc
acccgcggaacctttcgcgtgcgcggcgacacggtggatatttttcccgcccactacgag
gatcgcgcctggcgcgtgagcttcttcggcgacgaggtggaaggcatttacgagttcgat
cctctgaccggcaagaagacggtcgatctcgaatttgtgaaggtctacgccaactcgcat
tacgtgacgccgcgtccgacgctgctgcaatcgatcaagtccatcaaggaggagctgcgc
gcgcggctcgacgaactcaaccgcgccggccgtatcgtcgagtcgcagcggctggagcag
cgtacgcgcttcgacgtcgaaatgatggaggcgaccggggcctgcgccggcatcgagaat
tattcgcgctatctcaccggcagaaagccgggcgagccgccgcccacgctgttcgaatat
ctgcccgacaacgcgctggtcttcgccgacgaaagccatgtcagcgtgccgcagatcggc
gcgatgtacaagggcgactttcgccgcaaggcgacgctggccgaatatggcttccgtctg
ccctcctgcatggacaatcgcccgctgcgtttcgaggagtgggacgcgatgcgcccccag
accgtcagcgtttcggcgacgccgggcggctgggagatggagcagaccggcggcgtcttc
gtcgagcaggtcatccgccccaccggcctgatcgatccgccggtcgatgtgcggccggct
cgcgcgcaggtcgacgatctgctgcatgaggcgaaggcgacctcgcagatgggctatcgc
tcgctcgtgacggtgctgacgaagcgcatggccgaagacctcaccgaatatctgcacgag
aacggcgtgagggtgcgctacatgcactcggacatcgacacgatcgagcgcatcgagatc
atccgcgacctgcggctcggcgccttcgacgttctggtcggcatcaatcttcttcgcgag
ggtctcgatattcccgaatgcggactggtcgccattctcgacgccgacaaggaaggcttt
ctgcgctccgagacctcgctggtccagaccatcggacgcgcggcgcgcaatgtcgacgga
agggtgatcctctacgccgatcatgtcaccggctcgatgcagcgggcgatggacgaaacc
aaccgccgccgcgccaagcaggaggcctataacgccgagcacggcatcacgccggcctcg
atcaagcgcggcatcgccgatattctgggctccgtcgccgaggaagatcattacacggtg
gacaccggcgtcgacatcgcgcccgggcataatctcgcggcggtcatcgctgagctcgaa
aagaagatgcgcgaagcggcggccgacctcgctttcgaggaggcggcgcggctgcgcgac
gagatccagcgcctgcaaagggcggagctgctggccgacgcgggaccgatgaaatatctg
cgcgcagcctcagggggcgcgagcgaaagctccgggactcgtgcgcgcaaaccgaccgac
gcggacatggggccgcataatttcggcggcggcgaggcccggccgctcggccgtccgctg
ccgcgctccaccatgggcaagccgggaacaagggcggtgaagggcaagagcaagtaa
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