Methylocystis heyeri: H2LOC_006260
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Entry
H2LOC_006260 CDS
T06290
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mhey
Methylocystis heyeri
Pathway
mhey03420
Nucleotide excision repair
mhey03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mhey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H2LOC_006260
03430 Mismatch repair
H2LOC_006260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhey03400
]
H2LOC_006260
Enzymes [BR:
mhey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H2LOC_006260
DNA repair and recombination proteins [BR:
mhey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H2LOC_006260
MMR (mismatch excision repair)
Other MMR factors
H2LOC_006260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
DUF3553
DEAD
AAA_11
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
QGM47967
UniProt:
A0A6B8KJY7
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All DBs
Position
1395733..1398006
Genome browser
AA seq
757 aa
AA seq
DB search
MARAPRYLDALNPEQRAAVETLDGPVLVLAGAGTGKTRVLTTRIAHILASGRARAFEILA
VTFTNKAAREMRERVETLVGQGAEAMQWLGTFHAISAKILRRHAELAGLKPNFTILDTDD
QIRLLKQVLKAENIDDKRWPARALAMRIDGWKNRGLSYAQVPAGEAQSFADGKGAALYAL
YQERLKILNAVDFGDLLLETLRLFRENPDVLADYHRRFKYILVDEYQDTNTAQYLWLRLI
AQGRHNVCCVGDDDQSVYGWRGAEVENILRFEKDFPGARIVRLERNYRSTGHILAAASHL
IAHNEGRLGKTLFTDGAEGDRPTVTGVWDSEEEARAIGEDIEQLQRRGHDLEEIAILVRA
SFQMREFEERFITLGLPYRVIGGPRFYERAEIRDALAYLRCVAQPADDLAFERIVNTPKR
GLGDATLQMLHEYGRRENTPLMTSARILVESEEIKARPRATLRALLADFERWRSLIDVKP
HHELAEMVLDESGYTEMWRQDKTPEAAGRLENLKELVRAMEPFPDLAGFLEHVSLVMETD
EAAGAQKVSIMTLHGAKGLEFETVFLPGWEEGLFPHQRSLDENGRAGLEEERRLAYVGLT
RAKRRAKIYFATNRRIHGLWQSTMPSRFIDNLPPAHVEVVEAAGASQYGSYGVSRFANLD
SYNSGYDTPGWKRAQSAPRENYAKSAGRDSGRARQPKTIEGEVVGRSSPGSRFAPGARVM
HLKFGPGTVAGADGAKLTVDFDKAGRKMVLESFVEAT
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgcgcctcgctatctcgacgcgctgaaccccgagcaacgcgccgccgtcgaa
acgctggacggtccggtcctggtgctcgccggcgccggcaccggcaagacccgcgtgctg
accacccgcatcgctcatattctggcgagcggccgcgcccgcgccttcgagattctcgcc
gtcaccttcaccaacaaggcggcgcgcgaaatgcgcgagcgggtcgaaacgctggtcggc
cagggcgccgaggcgatgcagtggctcggcactttccacgccatttccgccaagatcctg
cgccgccacgccgagctcgcgggcctcaagcccaatttcaccattctcgacaccgacgac
cagatccgcctgctcaagcaggtgctgaaagccgagaacatcgacgacaagcgctggccg
gcgcgcgcgctcgccatgcgcatcgacggctggaaaaaccgcggcctctcatacgcccag
gttcccgcaggcgaagcgcagagcttcgccgacggcaagggcgccgcactctacgcgctc
tatcaggagcggctcaaaatattgaacgcggtcgatttcggcgacctgctgctggagact
ctgcggctgttccgggaaaaccccgacgtcctcgccgactatcaccggcgcttcaaatat
attctggtcgacgaatatcaggacaccaataccgcccaatatctctggctgcgcctcatc
gcccagggccgccacaatgtctgctgcgtcggcgacgacgaccagagcgtctatggctgg
cgcggcgccgaggtcgaaaacatcctgcgtttcgaaaaggattttcccggcgccaggatc
gtgcggctggagcgcaactaccgctccacgggacatattctcgccgccgcctcccacctc
atcgcccataacgagggccggctcggcaaaacgctgttcaccgacggcgccgaaggcgac
aggcctacggtcaccggggtatgggacagcgaagaggaagcccgcgcgatcggcgaggac
atcgagcaattgcagcggcgaggccatgatctcgaggaaatcgcgattctggtgcgggct
tcgttccagatgcgcgagttcgaggagcgcttcatcaccctcggcttgccctatcgcgtc
atcggcggtccgcgattttacgagcgggccgaaattcgcgacgctctcgcctatctgcgc
tgcgtcgcgcagcctgcggacgatctcgctttcgagcgcatcgtgaacacgcccaagcgc
ggcctcggcgacgccacgctgcagatgctgcacgaatacgggcggcgcgagaacacgccc
ctgatgacgtcggcccgcatcctggtcgaaagcgaagagatcaaggcgaggccgagggcc
accttgcgcgccctgctcgcagacttcgagcgctggcgttcgctcatcgacgtcaagccg
catcacgaactggccgagatggtgctggacgaatccggctacaccgaaatgtggcggcag
gacaaaaccccggaggccgccgggcggctcgaaaacctcaaagagttggtgcgggcgatg
gagcccttcccggacctcgccggcttcctcgagcatgtctcgctggtgatggagacggac
gaagccgcgggcgcccaaaaagtttcgatcatgacgctgcacggcgccaagggactcgag
ttcgagaccgtctttctgccgggctgggaggaagggctgttcccgcatcagcgctcgctg
gatgaaaacggccgcgccggattggaggaggaacgccgcctcgcctatgtcggtctcacg
cgggccaagcgccgggcgaaaatctatttcgccaccaaccgccgcattcacggcctgtgg
cagagcacgatgccttcgcgcttcatcgacaatcttccgcccgcccatgtcgaggtggtg
gaagcggccggggcgtcgcaatacggctcctacggcgtctcgcgcttcgccaatctcgac
agctacaactccggctacgacactccgggctggaaaagagcgcagagcgcgccgcgggaa
aactacgccaaaagcgcgggccgtgacagcggaagggcgcggcagccgaagacgatcgaa
ggcgaggtcgtgggaaggtcgagccccggctcccgtttcgcgccgggagcgcgggtgatg
catctcaaattcggcccgggcacggtcgccggcgccgatggcgccaaactcacggtcgac
ttcgacaaagccggccgcaagatggtgctggagagcttcgtcgaagcgacctga
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