Methylocystis heyeri: H2LOC_009660
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Entry
H2LOC_009660 CDS
T06290
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mhey
Methylocystis heyeri
Pathway
mhey03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhey00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H2LOC_009660 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhey03019
]
H2LOC_009660 (pnp)
03016 Transfer RNA biogenesis [BR:
mhey03016
]
H2LOC_009660 (pnp)
Enzymes [BR:
mhey01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
H2LOC_009660 (pnp)
Messenger RNA biogenesis [BR:
mhey03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H2LOC_009660 (pnp)
Transfer RNA biogenesis [BR:
mhey03016
]
Prokaryotic type
tRNA degradation factors
H2LOC_009660 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_RRP5
DUF7909
Motif
Other DBs
NCBI-ProteinID:
QGM45947
UniProt:
A0A6B8KE39
LinkDB
All DBs
Position
2111690..2113858
Genome browser
AA seq
722 aa
AA seq
DB search
MFQIHREEIEWAGQKLVLETGKIARQADGAVLATLGETTVLATIVSAKAAKPGQDFFPLT
VNYQEKAFAAGRIPGGYFKREGRPSERETLISRLIDRPIRPLFVEGYRNDTQVVVTVLSH
DLENDTDILSLVAASAALTLSGVPFMGPVGAARVGQINGALKVNPSIEEMKNSTLDVVVA
GTADAVLMVESEAKELSEETMLEAVMTGHRGFQPVIDAIIRLAERAAKDPRDFTPPDHSA
VIAAISEIGEKELRDAYKITVKQQRYAAVDAVRSKVLATLCPAEGEAKFTKEQVDEAFHE
LQAKVVRWNILDDGVRIDGRDLKTVRPIVAEVGVLPRTHGSALFTRGETQALVVATLGTG
EDEQFIDSLEGTYKERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPVLPAPA
EFPYTLRVVSEITESNGSSSMATVCGSSLALMDAGVPMKRPTAGIAMGLILEGERFAVLS
DILGDEDHLGDMDFKVAGTAEGVTSLQMDIKIAGITEEIMKVALAQARDGRMHILGEMAK
AISSSRAELGEFAPRIETLKIATDKIREVIGTGGKVIREIVEKTGAKINIEDDGTVKVAS
SDANSIKAAINWIKSIASDPEVGAIYDGTVVKTADFGAFVNFFGAKDGLVHISQLSSQRV
AKTTDVVKEGDKVKVKLLGFDDRGKVRLSMRVVDQTTGEDLEAKAKTEAKAAAEGAEQPA
TE
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgttccagattcaccgcgaagaaatcgaatgggcgggccagaagctcgttctggagacg
ggcaagatcgcccgccaggccgacggcgccgtgctcgccaccctcggcgagaccaccgtg
ctcgccaccatcgtctcggccaaggcggccaagccaggccaggacttcttccccctgacc
gtcaattatcaggagaaggccttcgcggccggccgcattccgggcggctatttcaagcgc
gagggacgccccagtgagcgcgagaccctgatctcccgcctgatcgaccgtccgatccgc
cccttgttcgtcgaaggctatcgcaacgacacccaggtcgtcgtcaccgtgctttcgcat
gatctcgaaaacgacaccgacatcctctccctggtcgccgcttccgcggccctgaccctc
tccggcgtgcccttcatgggcccggtcggcgcggcgcgcgtcggccagatcaatggcgcg
ctgaaggtcaatccttcgatcgaggagatgaagaactccaccctcgatgtcgtggtcgcc
ggcacggccgacgccgttctgatggtggaatcggaagccaaggagctttccgaagaaacc
atgctcgaggcggtgatgaccggccatcgcggcttccagccggtgatcgacgccatcatc
cggctcgccgagcgcgccgccaaggacccgcgcgacttcaccccgcccgatcactcggcg
gtcatcgccgccatctccgagatcggcgaaaaagaactgcgcgacgcctataagatcacg
gtcaagcagcagcgctacgccgcggtggacgcggtccggtccaaggttctcgcgaccctc
tgccccgccgagggagaggccaaattcaccaaggagcaggtggacgaagccttccacgag
ctgcaggccaaggtcgtccgctggaacatcctcgacgacggcgtgcgcatcgacggccgc
gacctcaagaccgtccgtccgatcgtcgccgaagtcggcgtgctgccgcgcacccatggc
tccgcgctgttcacgcgcggcgagacccaggccctggtggtcgcgacgctcggcaccggc
gaggacgagcagttcatcgactcgctggaaggcacctacaaggagcgcttcctgctccac
tacaacttccctccctattccgtcggcgagaccggccgcatgggctcgcccggccgccgc
gaaatcggccatggcaagctggcctggcgcgccatccatccggtgctgccggcgccggcc
gagttcccctacacgctgcgcgtcgtctccgagatcaccgaatccaacggctcgtcctcg
atggcgacggtctgcggctcgtcgctcgccctgatggacgccggcgtgccgatgaagcgt
ccgaccgccggcatcgccatgggcctcatcctcgaaggcgagcgcttcgcggtgctctcc
gacattctcggcgacgaggatcatctcggcgacatggacttcaaggtggccggcacggcg
gaaggcgtgacctcgctgcagatggacatcaagatcgccggcatcaccgaggaaatcatg
aaggtcgcgctggcccaggcccgcgacggccgcatgcacatcctcggcgagatggccaag
gccatctccagctcgcgcgcggagctcggcgaattcgccccccgcatcgagaccctgaag
atcgccaccgacaagatccgcgaagtgatcggcaccggcggcaaggtcatccgcgagatc
gtggaaaagaccggcgccaagatcaatatcgaggacgacggcaccgtgaaggtcgcctcc
tccgacgccaattcgatcaaggccgcgatcaactggatcaagtccatcgcctccgatccg
gaggtcggcgcaatctatgacggcaccgtggtgaagaccgccgacttcggcgccttcgtc
aatttcttcggcgccaaggacggcctcgtccacatctcgcagctctccagccagcgcgtc
gccaagaccaccgatgtggtgaaagagggcgacaaggtgaaggtgaagctgctcggcttc
gacgatcgcggcaaggtccgcctctcgatgcgcgtggtggatcagacgacgggcgaagac
ctcgaagccaaggccaagaccgaagccaaggctgccgccgaaggcgccgagcagcccgcg
accgaataa
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