Methylocystis heyeri: H2LOC_015360
Help
Entry
H2LOC_015360 CDS
T06290
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mhey
Methylocystis heyeri
Pathway
mhey03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhey00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H2LOC_015360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhey03019
]
H2LOC_015360
03400 DNA repair and recombination proteins [BR:
mhey03400
]
H2LOC_015360
Enzymes [BR:
mhey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H2LOC_015360
Messenger RNA biogenesis [BR:
mhey03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H2LOC_015360
DNA repair and recombination proteins [BR:
mhey03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H2LOC_015360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
AAA_30
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QGM46959
UniProt:
A0A6B8KH80
LinkDB
All DBs
Position
complement(3378487..3380214)
Genome browser
AA seq
575 aa
AA seq
DB search
MAALAPSGGLSRLWRSFRLRTPQVSFPPPTLDDARRFLRERFCHRDFLPGQAEALEAVLD
SRDVLMVAPTGAGKSLLYQLPAMLRPGLVVVVSPLIALMRDQLRRLAELGLPAATLHSGQ
DDLEYSQALEGVASGRIKLLYLSPERLAQESFVAVLRSRRVALLAVDEAHCISQWGHEFR
PDYRELGSIARRLGDPQVLAVTAGAAPRTREDIAELLFSRPPVAIVRSFARPNLCLSFEE
RRQRLGRLAAFARRHSGTSGIVYCNSRAGVDALARDLIGLGFDAVPYHAGLDPGRRAMNQ
DAFFTRKSVVMVATIAFGMGVDKADVRYVAHADVPDSVEGYYQEIGRAGRDGMEAETLLL
FSRRELSQRWRAPPEAFSSEADTGSREENTFKEGILGRHPHAQAKFMRARAMAQLCVAPG
CRTRNLLAQFGEDSPPCGRCDHCRGLLAPLRRLRSLSFRLRLEAASLVSTAYDPAAEPDG
LVDDEAMGVLGDVAPAPAPKLNVVQERLLRELTAARLRIARRRGRPPQRVADESVLLRLV
NLAAAAALPEPAALEGVDREDAAEFLRILRKSRED
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcttgcgccatccggcgggctgtcccggttgtggcgctcatttcgattgagg
acgccgcaagtgagtttccccccgccaaccctcgacgacgcgcggaggttcctgcgcgag
cggttctgccatcgggatttcctgcccggccaggccgaggcgctcgaggccgtgctcgac
agccgcgacgtcctgatggttgcgcccaccggcgctggcaagtcgctgctgtatcagctt
cccgccatgcttcgtcccggcctcgtcgtcgtggtctcgccgctcatcgccctgatgcgc
gaccagcttcgacgcctcgccgagctcggcctgccggcggcaaccctccattcggggcag
gacgatctcgaatattcccaggccctggaaggggtggcgtctggccggataaagctgctt
tatctttcgccggaacgcctcgcgcaggaaagcttcgtggcagttctccgcagcaggcgc
gtggctttgctggcggttgacgaagcccattgcatctcccaatggggccacgagttccgc
ccggactaccgcgaactcgggtcgatcgcacgccgcctcggcgatccccaggttctggcg
gtgacggcgggcgccgcgccccgcacccgggaggatatcgcggagcttctgttttctcga
cctcccgtggcgatcgtgcggtcctttgcgcgccccaatctttgtctttcctttgaggag
cgacgccagcggctcgggcgactcgccgctttcgcgcggcggcattcgggaacgagcggg
atcgtctattgcaattcgcgcgcgggggtcgacgcgctggcgcgcgacctcatcggtctg
gggttcgacgcggttccctatcacgccggcctcgatccgggtcggcgcgcgatgaaccag
gatgcgttcttcacgcgaaagagcgtcgtcatggtcgcgacaatcgccttcggcatgggg
gtcgacaaagccgacgtgcgttacgtcgctcatgccgacgttccggattccgtcgagggc
tattatcaggagatcggacgcgcgggccgcgacggcatggaggcggaaacgcttcttctc
ttcagccggcgcgaattgtcgcagcgctggagggcgcccccggaagcgttttcaagcgaa
gcggataccggttcgcgcgaagaaaacacgttcaaagagggaatcctcgggaggcatccc
cacgcccaggccaaattcatgcgggcgcgggcgatggcgcagctttgcgtcgcccccggc
tgccgcaccaggaacctgctggcgcaattcggcgaggatagcccgccctgcgggcgctgc
gatcattgccgcgggcttctcgcgccgctgcgccggctgaggtcgttatcgtttcgcctg
cgcctcgaggcggcgagcctcgtctcgacggcatacgatcctgcggcggagccggatggt
ctggtcgacgacgaggccatgggcgtcctgggagatgttgcgccggcgcccgcgcccaag
ctaaatgtcgtgcaggaaaggctgttgcgcgagctgacggcggcgcggctgcgcatcgcc
cgccgacgtgggaggccgccccagcgggtcgcggacgaaagcgttctgctgcgccttgtg
aacctcgccgccgccgcggcgctccccgagcccgccgctctggagggggtcgatcgcgag
gacgccgccgagttcctgcgcatcctgcgcaaatcgcgtgaggattag
DBGET
integrated database retrieval system
