Methylocystis heyeri: H2LOC_018815
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Entry
H2LOC_018815 CDS
T06290
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
mhey
Methylocystis heyeri
Pathway
mhey03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mhey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H2LOC_018815 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhey03400
]
H2LOC_018815 (uvrA)
DNA repair and recombination proteins [BR:
mhey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H2LOC_018815 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H2LOC_018815 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_25
BCA_ABC_TP_C
DnaJ_CXXCXGXG
nSTAND1
RsgA_GTPase
AAA_21
Motif
Other DBs
NCBI-ProteinID:
QGM47567
UniProt:
A0A6B8KIR9
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All DBs
Position
4184036..4187059
Genome browser
AA seq
1007 aa
AA seq
DB search
MANTAAKKTGLETSPPAAKTAPGESRTISIRGAREHNLKNVDLVIPRDELVVFTGLSGSG
KSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSKNPRS
TVGTVTEIHDYMRLLWARVGTPFSPATGLPIESQTVSQMVDRVLALPQGTRLYLLAPVVR
GRKGEYKKEIAEYTRRGFQRLKVDGVYYEIVDVPALDKKLKHDIDVVVDRIVVRPDLASR
LADSFETALELSQGLAVAEFADGSAATAAADVPVTAASLRVASHYAPAHIMFSSKFACPT
SGFTIPEIEPRLFSFNNPFGACPKCGGIGHEQKIDPDLVVPDPGLTLRKGAIAPWAKSSS
PYYMQTLEALGRHYKFRLETAFEALPAAAQRVILLGSGNEEIRFSYEDGFRNYDVKKPFE
GVIPNLERRYLETDSDASREDIARFMSATPCRACNGFRLKPEALAVKIAHKHIGEVSELS
VRAALEWFSALPAALTKKQNEIAYRILKEIRDRLVFLVDVGLDYLTLSRNSGSLSGGESQ
RIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDRLLDTLRRLRDLGNSVIVVEHDEDAILA
ADHVVDVGPGAGIHGGRIIAQGTPAEIMADPNSLTGQYLTGARQVRLAHKLRKPEPGRWL
NLFGARGNNLKNVDAHIPLGLFTCITGVSGGGKSTLIIETLYKAVAKKLNGAHEQPAPFE
RIEGLEQIDKIIDIDQSPIGRTPRSNPATYTGAFTPIREWFAGLPEAKARGYAPGRFSFN
IKGGRCEACQGDGVIKIEMHFLPDVYVTCDVCKGKRYDRETLEVKYREKSIADVLDMTVE
EAAELFKAAPAIRDRLETLKRVGLEYVRVGQQATTLSGGEAQRVKLAKELARRSTGRTLY
ILDEPTTGLHFHDVAKLLEVLHELVAQGNSVVVIEHNLEVIKTADWVIDLGPEGGDGGGE
IVAAGPPAEIVKEKRSHTGRYLGEAMARRPAAEQGGKAAVKGGRKGK
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaccgctgcaaaaaagaccggcctcgagacctctccgcctgcggcgaagaca
gcgccgggcgagtcgaggaccatctccatccgcggcgcgcgcgagcataacctcaaaaac
gtcgatctcgtgattccgcgcgacgagctcgtggtgttcacggggctttcgggttcgggc
aaatcttccctcgccttcgacaccatctatgccgaaggacagcggcgctatgtcgagtcg
ctctccgcctatgcgcggcagtttctcgagatgatgcagaagccggacgtcgaccagatc
gacgggctctccccggccatatcgatagagcagaaaaccacctcgaaaaacccgcgctcg
accgtgggaacggtgacggaaatccacgattacatgcgtctcctgtgggcgcgcgtcgga
acgcctttttctcccgccaccggcctgccgatcgagagtcagaccgtctcccagatggtc
gaccgggtgctcgccttgccgcaggggacgcggctctacctgctggcgccggtcgtgcgc
ggacgcaaaggcgaatacaaaaaggaaatcgccgaatatacgaggcgcgggttccagcgg
ctcaaggtcgacggcgtctattacgagatcgtggatgttccggcgctcgacaaaaagctc
aagcacgacatcgacgtcgtggtcgaccgcatcgtcgtgcgccccgatctcgcctcgcgc
ctcgcggatagtttcgagaccgccctggagctgtcccaggggctggcggtggccgaattc
gccgacggctccgcggcgaccgccgctgcggatgttccggtgacggcggccagcctgcgc
gtcgcctcgcattacgcgcctgcgcatatcatgttttcttcgaaattcgcctgcccgaca
tccggtttcacgatacccgaaatcgagccgcggctgttctcgttcaacaatcctttcggc
gcctgccccaaatgcggggggatcgggcacgaacagaagatcgatcccgacctcgtcgtg
cccgaccctgggctgaccctgcgcaagggagcgatcgcgccctgggcgaaatcatcttcg
ccctattacatgcaaactctcgaagctttggggcgccactacaaattccgcctggagacg
gcgttcgaggcgctgccggcggcggcccagcgcgtgatcctgctcggatcgggcaatgag
gaaatccgcttctcctacgaagacggttttcgcaactatgacgtcaagaagccgttcgag
ggcgtcattcccaatctggagcgccgttatctggagacggacagcgacgcctcgcgcgag
gacatcgcccgcttcatgtcggcgacgccctgccgggcctgcaacggttttcgtttgaag
cccgaggctctggcggtgaaaatcgcccacaagcacatcggcgaggtgtcggagctttcg
gtgcgcgccgcgctggagtggttttccgcgctgcccgcggccctcaccaagaaacagaac
gagatcgcctatcgcatattgaaggaaatccgggaccgtctggttttcctggtcgacgtc
gggcttgattatctcactctgtcccgcaattcaggctctctgtccggcggggaaagccag
cgcatccggctcgcgtcgcagatcggctcggggctgaccggcgtgctctatgtgctcgac
gaaccctcgatcggcctgcaccagcgcgacaacgaccggttgctcgacacattgcgcagg
cttcgcgatctcggcaacagcgtcatcgtcgtggagcacgacgaagacgccatattggcc
gccgatcatgtcgtcgacgtcgggccgggcgccggcattcacggcggcaggatcatcgcc
cagggaacgccggccgagatcatggcggaccccaactcgctcaccgggcagtatctgacc
ggcgcgcgtcaggtcaggctggcgcacaagctgcgcaagcccgaaccgggcagatggctg
aatctgttcggcgcccgcggcaacaacctcaagaatgtcgacgcccatatcccgctcggc
ctgttcacctgcatcaccggagtttcgggcggaggcaaatcgacgctcatcatcgaaacc
ctgtacaaggccgtcgccaagaaactgaacggcgctcacgagcagccggcgcccttcgag
cgcatcgagggcctcgaacagatcgacaagatcatcgacatcgatcaatccccgatcggg
cgcacgccgcgctccaatccggcgacctacaccggcgccttcacgccgatacgcgaatgg
ttcgccggcctgccggaggccaaggcgcgcggctatgcgccggggcgtttctccttcaac
atcaaaggcgggcgttgcgaggcctgccagggcgacggcgtcatcaagatagagatgcac
ttcctgccggacgtttacgtgacctgcgacgtctgcaagggcaagcgttacgatcgcgag
acgctggaagtgaaataccgggaaaaatccatcgccgacgtgctcgacatgacggtggag
gaagcggcggaactgttcaaggctgcgccggcgatccgcgaccggctggagacgttgaag
cgcgtcggactggaatatgtgagggtcggccagcaggcgacgacgctctcgggcggcgag
gcgcaacgggtcaagctcgccaaggagcttgcgcgccgatccaccggacgcaccctctat
attctcgacgagccgaccacgggattgcatttccacgatgtggcaaagctcctcgaggtg
ctgcacgagctggtcgcgcagggcaacagcgtcgtcgtcatcgagcacaatctggaagtc
atcaagaccgcggattgggtgatcgacctcggtccggaaggcggcgacggcggcggcgag
atcgtcgctgcgggcccccccgcggaaatcgtgaaggaaaagcgcagccacaccgggcgc
tatctcggcgaggcgatggcgcggaggcccgcggcggagcagggaggaaaagcggccgtc
aagggaggtcgcaagggaaaatag
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integrated database retrieval system
