Methylocystis heyeri: H2LOC_020010
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Entry
H2LOC_020010 CDS
T06290
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
mhey
Methylocystis heyeri
Pathway
mhey02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mhey00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H2LOC_020010 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mhey03000
]
H2LOC_020010 (nifA)
Transcription factors [BR:
mhey03000
]
Prokaryotic type
Helix-turn-helix
Other families
H2LOC_020010 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
GAF_2
AAA_5
Mg_chelatase
AAA_2
AAA
bpMoxR
TIP49
AAA_16
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
QGM47775
UniProt:
A0A6B8KLA9
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Position
4431805..4433532
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AA seq
575 aa
AA seq
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MGYHPGTSMSSSAVRPMDLSESALVGIYEVSKLLASPNRLERTLAGVLALLSSFLDMRHG
LFALLDKSGEPEVVVGSGWSEGNAKKYFDRLPQRAIGQIVATKMPLVVENVHTSPLFEGS
DLSEWGPTDGEPFSLVGVPIKEGDNVVGTLTIDRVFSDRSSVRFDHDVRFLTMIANLVGQ
TLRLQKLIARDRERLMQENARLGKIERPAISEPRFDGIKGIVGSSPAVRAVVDKIRIVAK
SRSTVLLRGESGTGKELFAAAIHNLSPRHAKPFVKLNCAALPESVLESELFGHERGAFTG
AANMRKGRFELADGGTLFLDEIGEITPAFQAKLLRVLQEGEFERVGGARTIKVDVRFVCA
TNKNLEEAVQKNEFRADLYYRISVVPIFLPPLRERKGDLEPLAGEFLRRFNAEQGTRLTM
SPSALDVLSECGFPGNIRELENCIYRTATLARGDAIVDRDFSCRNDGCLSAVLWSGSPES
APSPLFKQQLPIVPAQRSPGAASAHPSSGAEEEDEAAFSSRADSSAGEQRSERERLIHAM
EQAGWVKAKAARLLNLTPRQIGYALQKHAIPIKKF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgggctatcatcccggaaccagcatgagcagttctgcagtccgtcctatggacctgagc
gaatcggctctggtcggcatatacgaagtttccaagctcctcgcttcgcccaaccgcctc
gagcggacgctggccggcgttctggcgctcctctcgagcttcctcgatatgcggcacggc
cttttcgcattgctcgacaagagcggcgaaccggaggtcgtcgtcggctccggctggtcc
gaaggcaatgcgaagaaatatttcgatcgcctgccgcagcgggcgatcggtcagatcgtg
gccaccaaaatgccgctggtggtcgaaaacgtgcacacttcccctcttttcgagggctcc
gacctttcggagtgggggcctaccgacggcgagcctttttcgctggtgggcgttccgatc
aaggaaggcgacaatgtggtgggcacgctcaccatagaccgcgttttcagcgaccgctcg
tcggtccgcttcgaccatgacgtgcgcttcctcaccatgatcgcgaatctggtgggccag
accctgcggctgcaaaagctgatcgcgcgggaccgcgaaaggctgatgcaggaaaacgcg
cgtctgggcaagatcgagcgtccggcgatatcggagccgagattcgacggcataaagggc
atcgtcggctcgagccccgcggtgcgggcggtggtcgacaagatccgtatcgtcgccaaa
tcccggtcgacggttctgctgagaggcgagtccggcaccggcaaggaattgttcgcggcc
gcgatccacaatctttccccccggcacgccaagcctttcgtcaagctgaactgcgccgcg
ctgcctgagagcgtgctcgaatccgagctgttcggacatgagcgcggcgcattcaccggc
gccgccaacatgcgcaagggccgtttcgagctcgccgacgggggcaccctgtttctggac
gagatcggcgagatcacgcctgcttttcaggcaaagctgctccgcgtcctgcaggagggc
gaattcgagcgcgtaggcggggcccgcaccatcaaggtggatgtgcgcttcgtctgcgcc
accaacaaaaacctggaagaagcggtgcagaagaacgagttccgcgccgacctctactac
aggatcagcgtggtgccgatcttcctgccccctctgcgcgagcgcaagggggacctcgag
ccgctcgccggcgagtttctgcgccgcttcaacgcggagcaggggacccgtctcacgatg
tcgccctctgcgctcgacgtgctttccgaatgcggcttccccggcaacattcgcgagctg
gagaactgcatctaccgtactgcgacattggcgagaggcgacgccatcgtcgaccgggat
ttttcctgccgcaacgatggctgtctttccgcagtgttgtggagcggctcgccggagtcg
gcgccctcgccgctgttcaagcagcaattgcctatcgttccggcgcagcgttcccccgga
gcggcgtccgcccacccatcctcgggcgcagaggaagaagacgaggccgccttctcttcg
agagcggactcctctgctggcgagcagcgttcggagcgggaaagactgatccacgccatg
gagcaggcgggatgggtcaaagccaaagcggctcgcctgctgaatttgacgccgcgccag
atcggctacgctttgcaaaagcacgccatccctatcaagaagttctga
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