Methylocystis heyeri: H2LOC_020955
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Entry
H2LOC_020955 CDS
T06290
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mhey
Methylocystis heyeri
Pathway
mhey03420
Nucleotide excision repair
mhey03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mhey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H2LOC_020955
03430 Mismatch repair
H2LOC_020955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhey03400
]
H2LOC_020955
Enzymes [BR:
mhey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H2LOC_020955
DNA repair and recombination proteins [BR:
mhey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H2LOC_020955
MMR (mismatch excision repair)
Other MMR factors
H2LOC_020955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
UvrD_C
Viral_helicase1
AAA_30
AAA_11
YndJ
Motif
Other DBs
NCBI-ProteinID:
QGM48258
UniProt:
A0A6B8KMU3
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All DBs
Position
unnamed1:93009..94736
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AA seq
575 aa
AA seq
DB search
MTSVYKPTDEQLNVISHEGHAFVLACPGAGKTRTMVERARTLFSRIDDRRGIAFLSFTNA
AIDELEARLQRLGVLPTPLFPSFVGTFDRFLWHFLIGPFGVGNSRATPRLVPGKGDWEVK
PFDTAQPLPLKAFERSTSKIIADEVRRLGFAPQKGAAAWETTAKKMIERSRAEGLLDFED
VRDCARERLTDPDFAARLGAALAGRFREVVVDEAQDCNPADLQIVDWLRGTGMRVKLICD
PNQAIYAFRGGVTDELLAYSKKFDREDQLTMSGNFRSSPAICAAISQLRPPHARGTPDVA
VGPNKHDPSPVYILSYGGAGVPTSIGRKFQELTESLGELAYATPVLASTWQSASKAAGRP
VVDPGGDKTLLLADAVMHFHFAFEAGNRRRALTRLHRSVLLVRGAIAKKSDYQDHIEAQG
LHDGRWRAEIIGLGEALQLRPGETDYQWLDRARQLLDHDLIGSSTIKNRLHAHVDLKTML
VAPSTNDLPARSIHSVKGLEFPAVCVVLTSKGAGSILDVLEGKSTAAEPMEQARKIYVAA
SRAERRLAIATPKSQANRLQQVLDADGRSVEIIAI
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtcggtctacaagccgactgacgaacaattgaacgtcatcagccatgagggccac
gccttcgtgctggcgtgtcccggcgcgggcaagacgcggacgatggttgagcgggcgcgg
accttattctctcggatcgacgaccgccggggcatcgcattcctgtcgttcacgaatgcg
gcgatcgacgagctggaagcgcggctgcaacgtctaggcgtgctgcccactccgctcttt
cctagcttcgtcgggactttcgaccggtttttgtggcacttcctgatcggcccttttggc
gtgggaaacagccgcgccacacctcggctggtgcccgggaaaggcgactgggaggtcaag
ccattcgacacggctcagccgctgccgctgaaggcgttcgaacgatccacgagcaagatc
atcgcggacgaagttagaaggcttggcttcgccccacaaaagggcgctgctgcatgggag
accacggcgaagaagatgatcgaaaggtctcgagcggagggcctgctggacttcgaagat
gttcgagactgcgcccgggagagactgaccgatcccgatttcgcagccaggttgggagcg
gcgttggcggggcgtttccgggaggtcgtggtagacgaggcccaggactgcaatcccgcc
gacctccagatcgtggactggctacgcggaacgggtatgagggtcaaacttatctgcgac
ccaaatcaagcgatttacgcgttccgcggcggcgtgacggatgagctcctagcctactcc
aaaaagtttgaccgagaagatcaactgaccatgagtgggaacttccgctcttcgcccgcg
atctgcgcggcgatttcccaactgcgtcccccgcacgcgcggggcacgcctgatgtggcc
gtcgggccaaataagcatgatccgtcacccgtctatattctgtcgtatggcggcgcaggc
gtgccgaccagcatcggccgaaagttccaggaactaaccgagagcctcggcgagctagca
tatgctacgcccgtgctcgcctccacttggcagagtgcgagcaaggcagctggaaggccc
gtcgtcgaccccggaggcgataagaccctgctgctggccgatgcggtgatgcactttcac
ttcgctttcgaggcgggaaaccgcaggcgggcactaaccaggctccaccgatcagttctg
ctcgttcggggtgccattgccaagaagtccgactaccaggatcacatcgaggcccaagga
ctgcatgatggccgctggcgcgccgagatcatcggacttggagaagcattgcagctccgc
ccaggggaaactgattatcaatggttggatcgcgcaagacaacttctggaccacgacttg
attggaagctcgaccatcaagaaccggctgcatgcccatgtggacctgaagacaatgctc
gtggctccgtccacgaacgaccttcccgctcgctcgatccattccgtgaaaggtttagag
ttccccgcggtctgcgtcgtcctcacgagcaagggggccggcagcatcctagatgtgctt
gagggcaaatcgaccgctgcagagccgatggagcaggcgcggaagatctatgtcgcagca
tcacgagcggagcggcgcttggccatcgcaacaccgaagagccaagcgaaccggctgcag
caggttcttgatgcggacggccgtagcgttgagatcatcgcgatctag
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