Mycoplasma haemofelis Ohio2: MHF_1541
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Entry
MHF_1541 CDS
T01944
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mhf
Mycoplasma haemofelis Ohio2
Pathway
mhf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MHF_1541 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhf03021
]
MHF_1541 (rpoC)
03400 DNA repair and recombination proteins [BR:
mhf03400
]
MHF_1541 (rpoC)
Enzymes [BR:
mhf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MHF_1541 (rpoC)
Transcription machinery [BR:
mhf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MHF_1541 (rpoC)
DNA repair and recombination proteins [BR:
mhf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MHF_1541 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
SAM_TNK
Motif
Other DBs
NCBI-ProteinID:
AEG73773
UniProt:
F6FHE3
LinkDB
All DBs
Position
complement(1071401..1075306)
Genome browser
AA seq
1301 aa
AA seq
DB search
MARRSSSAFKSQSSPNDFTIKALQISLASPEYVRSLSKGEVTSFETINYKSLRPEKGGLF
CESIFGPIKDYECSCGKYKQVKYKGKKCEKCKVYITQSLVRRDWMGHIELACPVAHIWMI
KELPLPAKISLILGIKYKHVEEVVYFVNYIVLDPGHLQVEGKTLFDPLEIIDVSNSKSSI
ASLAKLRTLLRTIYETIQKENPESYLTDLNYQQGRAYYKALSNSNLPFSIMDMFEYIEKH
TGLKVGIGAEAIYELLKKVDLESLEYKLTQELNVNFPSGLNYADPKVRKILSRLQVIRWF
KESKNRPEWMILKVIPVIPPNLRPIIQLSGGRFTSSDINTFYRRIIVRNDRLARILNFNV
AHIISNNEKRMLQEAVDSLIDNSSRKKPLTARDRHPLKSITDHLKGKQGLFRQNLLGKRV
DYSGRSVIVVGSELKMYQVGLPILMILSLFKPFIIRDLIRKVDDNGVECVPIAANIKTAS
KMIMEQSDEIWPVVHKVIKERPVLLNRAPTLHRLSIQAFEPILVEGKAICLHPLVTTAFN
ADFDGDQMAVHLPLSAEAVHEARSMLLAPWQILGPKDGKPIVTPSQDMVLGIYHLTTEDK
EAIGFGSLFATPDEVVHAYQLGKVDLSSIIAIGTSGFPKKRFPKSGILITTVGKIIFNSR
LPEDYKFINQSEGMWVSENDILDYGVSRLDYINAYQEKEPFAKSVIGRLIEDLYDNYSCQ
DLAPVLDSIKDMGFEYSTKSCTTISAFDVPKFSDKQSLLEEADKLVEQQKSFFRKGLVTD
DEKYKNVIAIWSSVKDKVSDHIKNALKSKEFQSNPIVIMARSGARGNVSNFIQLSGMRGL
MNKSYNYDQNTNTKVVRDIIEVPIKHSFIEGLTVIEYFNSSYGARKGMTDTAMKTAKSGY
TTRKLVDAAQEVIVKVEDCGSNKGLIVEELRDKEHSMPIKTLKDRIVFKCAHIDILHPET
GEVIVGANEVITKEAADKIVAAGITKVQVRSVLHCRLKQGICQKCFGYDLTTKQMIDVGT
TIGVIAAQSIGEPAVQLTMRTFHSGGVAGESNISQGFERLRQLFEIVAPKKWETSVISEI
TGTVENIEIRDDERVVTVSSDINRREYNCDLNLPILVKKGQKINFGDRICDGSVDLKKLL
EVSGVEAVRQYIVQEIWKVYWIQGIDVSEKYIEIIVRQLTSRLKVLSPNDSKWAMGEVVD
YSSFVDECAKLLLDGKTPPIATSIIFGLEEVPEKTNSFLAAASFQDTKKILTDACVRGQI
DYLNSLKENIMVGNLIPAGTGLKSADEVISDERSNRNVFNY
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggaggagttctagtgcttttaaatcacaaagcagtcctaatgatttcaccatt
aaggctttacagatctctttagcttctccggagtacgtaagatctctatctaagggtgaa
gttacttcttttgaaaccattaactataagtctctaaggccagagaagggagggttattc
tgtgaaagtatttttgggcctatcaaggattatgagtgttcttgtggtaaatataagcag
gtaaagtacaagggtaagaaatgtgagaagtgtaaggtatacatcacccagtccttagtg
cgtcgtgactggatgggtcacatagaattggcttgtccggttgctcacatctggatgata
aaggagcttcctcttcctgccaaaatctcccttatattaggtattaagtacaagcacgta
gaagaggttgtttactttgtaaactacatagttttagatccggggcatcttcaagtagag
ggtaagactttatttgatccccttgaaatcatagatgtttccaactccaagagttctatc
gcttcacttgctaaattaagaactcttcttagaactatatacgagactattcagaaggag
aatccggagtcctacttaactgacttaaattaccaacaaggtagagcatattataaagcc
ctttctaactcaaacttgccattctccatcatggacatgtttgagtatattgagaaacac
acagggcttaaagttgggataggtgcggaagcaatttacgaacttcttaagaaggttgat
cttgaaagtttggaatataaattgactcaggagcttaatgtaaacttccctagtggtctg
aattatgcagatcctaaggttagaaagattctttcaagacttcaggttattagatggttc
aaggaatccaagaatagaccagagtggatgatcttaaaggttatccccgttatacctcct
aatcttcgtcctattattcaactttccggtggtagatttacgtcttctgatatcaacacc
ttttatagaagaattattgttagaaatgacaggcttgccagaattctgaactttaatgtt
gcgcatatcatctccaataatgaaaagagaatgttgcaagaggctgtggactccttgatt
gataactccagtagaaagaaacctttaactgctagggatagacatcctcttaaatctatt
acagatcatcttaaaggtaagcaaggtctcttccgtcaaaaccttttaggtaagagggtt
gactattccggtcgttccgttattgttgtagggtctgaactgaaaatgtatcaggtaggg
ttgcctatcctgatgattctgtctctatttaagccatttattattagggacttaattaga
aaggttgatgacaatggagttgaatgtgttcctattgcagccaatattaagaccgcttct
aagatgattatggagcagtctgatgaaatctgaccagttgttcacaaggttataaaagaa
aggccagttcttctaaaccgtgctcctactcttcaccgtttaagtattcaagcttttgag
cctatccttgttgaaggtaaggctatctgcttacaccctcttgttacaaccgcctttaac
gctgacttcgacggtgaccaaatggctgttcacttacctctgtctgctgaagcggttcat
gaggcgagatctatgttattggctccttgacaaattcttggccctaaggatggtaagcct
attgttactccatcccaagatatggtgttgggtatctatcacttaactactgaggacaag
gaagctattggttttgggtctttatttgcaactcccgatgaagttgttcatgcttaccaa
ctaggtaaagttgatctgtcttctattattgcgattgggacttctggttttcctaagaag
agatttccaaaatcaggtatcttgatcaccactgtagggaagatcatattcaacagtagg
ctcccagaggattacaagtttattaatcaaagtgaagggatgtgggtgtcagagaatgat
atcttggattacggagtaagtaggttggattacattaatgcttatcaagagaaggagcca
ttcgcaaagtctgttattggtagattgatagaggatctttatgacaactattcttgtcaa
gatttagctccggttctggactccattaaagatatggggtttgagtattccaccaagtcc
tgtacaactatttccgctttcgatgttcctaagttctccgataagcaatccctcctagaa
gaggctgataagttagttgagcaacagaaatccttctttaggaagggtcttgtcactgac
gatgagaaatataagaacgttattgccatttggtcttccgttaaggacaaggtttctgat
cacattaagaatgctcttaaatctaaggaatttcaaagtaaccctattgttatcatggcc
agatctggtgctaggggtaatgtatctaactttattcagctatccggaatgaggggtctg
atgaacaagtcctataactatgaccagaatacaaataccaaggtagttagggatattatt
gaggttcctattaagcactccttcattgaagggcttacagttattgaatactttaactcc
tcctatggtgccagaaaaggtatgaccgataccgccatgaaaacagctaaatctggttat
acaactaggaagttggtggatgctgctcaagaggttattgttaaggttgaggactgtgga
tccaataagggattgattgttgaagagcttagagataaggagcattcaatgccgattaag
acccttaaagatagaatcgtatttaaatgtgctcatattgatattcttcaccctgaaacc
ggagaagttattgttggtgcaaatgaggtaattactaaggaagctgcagacaagatagtg
gctgctgggattactaaggtacaggttagatccgttcttcactgtagattgaaacagggt
atttgtcaaaaatgctttggttacgacttgaccacaaaacaaatgattgatgtgggaact
actatcggtgttatcgcggctcaatccatcggtgagccagctgttcagttgaccatgaga
acgttccactccggtggggttgctggtgagtctaatatttcccaaggttttgagagattg
agacaactatttgaaatagtggctcctaaaaaatgggagacttctgtgatctctgaaatt
actggtacagttgaaaatatagaaattagggatgatgagagggttgttactgtttcaagt
gatatcaacagaagggagtacaactgtgatttgaacctgccgatattagttaagaaaggg
cagaagattaatttcggtgacagaatatgtgatggatctgtagatcttaaaaagctgtta
gaggtttctggtgttgaggctgtaaggcaatatatagttcaagagatttggaaggtttat
tggattcaaggtatcgatgtttccgagaagtatattgagatcatagtaagacaattgaca
tctagacttaaagtgctttctccgaatgactctaaatgagctatgggtgaggttgtagac
tactcttcctttgttgatgaatgtgctaaattgcttttggatgggaaaacccctcctatt
gccacaagcatcatcttcggtcttgaggaggtgcctgaaaagacaaactccttcttggct
gccgcttctttccaagataccaagaagatcttgacagatgcttgtgttagaggtcagatt
gattacttgaattccttgaaagagaatatcatggttggtaacttgattcctgctggaaca
ggacttaaatctgctgatgaagttatttctgatgagagatctaatagaaatgtctttaat
tattag
DBGET
integrated database retrieval system
