Megamonas hypermegale: MHY_18220
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Entry
MHY_18220 CDS
T02593
Name
(GenBank) Transcription-repair coupling factor (superfamily II helicase)
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
mhg
Megamonas hypermegale
Pathway
mhg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mhg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MHY_18220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhg03400
]
MHY_18220
Enzymes [BR:
mhg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MHY_18220
DNA repair and recombination proteins [BR:
mhg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
MHY_18220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRCF
Helicase_C
Cas3-like_C_2
RecG_dom3_C
Yqai
Motif
Other DBs
NCBI-ProteinID:
CBL06576
LinkDB
All DBs
Position
complement(1355511..1356686)
Genome browser
AA seq
391 aa
AA seq
DB search
MSLVGARDMSVIETPPQERFPVQTYVIENNDMIIKDAIKREIRRGGQVYFIYNRVETIDK
MYLHLLSMLPDVKIGIAHGQMSEEELERAMLNFYEGKYDILLATSIIENGLDVSNANTII
IYDADYFGLSQLYQMRGRVGRSKQMAFAYFIYQKDKILSEMAEKRLQAIKEFAQLGSGFK
IAMRDLEIRGAGDLLGSQQHGHISSVGFEMYCRLLEEAVETLQTGKEPEKVVEPIIELKE
DAYLDGEYINNATNKIEIYQRIAAIRTDEHADQLEEELIDRFGALTEPVKKIMQVARLKN
YARKLKIKSIIEKPAFVEICFDKAPNIEPENMLLAKKQFDNLLKFVPKQNTIQIKITPIN
KKHIINLCLKVVKVLTGEKLQKMTLKKEEKK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttgtaggtgctagagatatgtctgttatcgaaacaccaccgcaagagcgtttc
cctgtgcagacttatgtaattgaaaataatgatatgattatcaaagacgctattaagcgt
gaaattcgccgtggtggtcaggtatattttatttacaatagagtagaaactatagataag
atgtatttgcatttattatctatgcttcctgatgtaaaaatagggatagctcatgggcag
atgagtgaagaagaattagaaagagctatgctcaatttttatgaaggaaaatacgatatc
ttattggctacaagcattattgaaaatggtttagatgtatcaaatgccaatactataatt
atttatgatgcagattatttcggtctatctcagctctatcagatgcgaggtcgtgtaggt
cgttctaaacaaatggcttttgcatactttatttatcagaaagataaaatcttatctgaa
atggcagaaaagagattacaggcgataaaagaatttgctcaattaggttctggatttaaa
atcgctatgcgagatttagaaattcgcggtgctggtgatttattggggtctcaacaacat
ggtcatatttctagtgtaggttttgagatgtattgtcgtctattagaagaagcagtagaa
acattgcaaacaggtaaagagccagaaaaagtagtagaaccgataattgaattgaaagaa
gatgcttatttagatggagaatatataaataatgccactaataagattgaaatttatcaa
cgtattgcagcgatacgaacagacgaacatgcagaccaattagaggaagaattaatcgac
cgttttggtgcattgactgaacctgtaaagaaaataatgcaagtagcacgcttgaaaaat
tatgctcgtaaattaaaaataaaatctattattgaaaaacctgcttttgtggaaatatgt
tttgataaagcaccaaatatagagccagaaaatatgcttttagcgaaaaagcaatttgat
aatctattaaaatttgtgccaaaacaaaatacgatacagataaaaattacgccaataaat
aaaaagcatataataaatttatgtttaaaagtagtaaaagttttaacaggtgaaaaatta
cagaagatgactcttaaaaaagaggagaaaaaataa
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