Mesomycoplasma hyorhinis GDL-1: MYM_0004
Help
Entry
MYM_0004 CDS
T01730
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
mhh
Mesomycoplasma hyorhinis GDL-1
Brite
KEGG Orthology (KO) [BR:
mhh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mhh03016
]
MYM_0004 (gidA)
03036 Chromosome and associated proteins [BR:
mhh03036
]
MYM_0004 (gidA)
Transfer RNA biogenesis [BR:
mhh03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
MYM_0004 (gidA)
Prokaryotic type
MYM_0004 (gidA)
Chromosome and associated proteins [BR:
mhh03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
MYM_0004 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
Pyr_redox_2
Thi4
DUF6514
NAD_binding_8
FAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AEX13818
LinkDB
All DBs
Position
2936..4795
Genome browser
AA seq
619 aa
AA seq
DB search
MNKKQLFFNAIVVGGGHAGIEAIYALSKAENLKVALVTLNKHKLASMPCNPSIGGPAKGI
ITREIDALGGVQGYFSDLAMIQVKYLNESKGPAVKAIRAQIDKEKYSKLILKDIKQRKNI
TLIEDLVTKLEVKNKAISGIYLEKLGLIKTKSLIITTGTYLDSKILRGEEQYKSGPDNER
TSNLLSDNLKELGFELQRLKTGTPPRIYSDSIDFSQVEREVLPLVNISFSSKTKQNIKKQ
ISCFLTYTNEETHKIINENLNRSSMYSGAINGVGPRYCPSIEDKIVRFSTKERHQIFFEP
ETKRQDIMYINGMSTSMPVDVQDKLIRTIPGLKNARVAKWGYAIEYDALNPLELKRSLES
KKVKNLFFAGQMNGTSGYEEAAAQGLVAGINAKEKLLKKRPIEILRNDGYIGVLIDDLVT
KGTKEPYRMLTSRAEYRLILRNDNADIRMAKYAKKTGMISLKEYEKIIEKYRKIDKMIDK
LSKEFVSPKDKLGKKYEVSDGTSKLKLISRPTVDYKDVLPDFEYAYELMVIARLEGYIRK
QNNDAQKMIRLEKLKIPANIDYKKVNNLSSESVDKLMKIRPNTIGQASRISGVNPADIQM
LLFYLKVEKEKELQAKNTN
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaacaactattttttaatgctatagtagtaggtggagggcatgctggaatt
gaagctatttatgccctttctaaagctgaaaatttaaaagtagcattagttactttaaac
aaacataaattagcttctatgccatgtaatccatcaattggtggacctgcaaaaggtata
ataactcgtgaaattgatgctcttggtggtgttcaaggttatttttcagatttagcaatg
attcaagttaaatatttaaatgaatcaaaaggtccagcagttaaagcgattagagcacaa
atagataaagaaaaatattcaaaattaattctcaaagacattaagcaacgcaaaaacatt
actttaatagaagatttggtaactaaattagaagttaaaaacaaagccattagtggaatt
tatttagaaaaacttggattgattaaaactaaatctttgattattacaacagggacttat
ttagattctaaaattttaagaggtgaagaacaatacaaatctggacctgataatgaaaga
acttcgaatttactttctgataatttaaaggaattaggatttgaattacaaagattaaaa
acaggaaccccgccacgaatttattccgattcaattgatttttcgcaagtggaaagagaa
gttttgcctttagttaatattagtttttcttcaaaaacaaagcaaaatattaaaaaacag
atttcttgttttttaacttatacaaacgaagaaactcacaaaattattaatgaaaatcta
aatagatcttcaatgtattcaggtgctattaatggagttggtccaagatattgtccttca
attgaagataaaattgttagatttagcacaaaagaaagacaccaaatttttttcgaacct
gaaacaaaaagacaagatattatgtatattaatggaatgtcaacttcgatgcctgttgat
gttcaagataagttaattagaactattccaggacttaaaaacgctagggtagctaaatga
ggttatgcaattgaatacgatgctttaaatcctttagagctcaaaagaagtcttgagtct
aaaaaagttaaaaatctattttttgctggacaaatgaatggaacaagcggatacgaagaa
gcagcagctcaaggtttagtagctggtataaatgcaaaagaaaagcttctaaaaaaaaga
ccaattgagattttacgaaacgatggatacatcggagtcttaattgatgacttagttaca
aaaggtacaaaagaaccatatagaatgttgacttctcgtgctgaatacagacttatttta
agaaatgataatgctgacattagaatggctaaatatgctaaaaaaacaggtatgatttct
ttaaaagaatatgaaaaaattattgaaaaatatcgaaaaatcgacaaaatgatagataaa
ttatctaaagaatttgtttctccaaaagacaaattaggaaagaaatatgaagtaagtgat
ggaacttcaaaacttaaattaatttctcgtccaactgttgattacaaagatgttttacca
gattttgaatacgcatatgaactcatggttatagctagattagaaggatatattagaaaa
caaaataatgatgctcaaaaaatgattagacttgaaaaactaaaaattcctgcaaatatt
gattataaaaaagtaaataatctttcttccgaatcagttgataaattgatgaaaataaga
ccaaatacaatagggcaagcttcaagaatttcaggggttaatcctgctgatattcaaatg
ttattgttttatttaaaagttgaaaaggaaaaagaattacaagctaaaaacacaaattag
DBGET
integrated database retrieval system
