Mesomycoplasma hyorhinis GDL-1: MYM_0317
Help
Entry
MYM_0317 CDS
T01730
Symbol
pcrA
Name
(GenBank) ATP-dependent helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mhh
Mesomycoplasma hyorhinis GDL-1
Pathway
mhh03420
Nucleotide excision repair
mhh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mhh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MYM_0317 (pcrA)
03430 Mismatch repair
MYM_0317 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhh03400
]
MYM_0317 (pcrA)
Enzymes [BR:
mhh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MYM_0317 (pcrA)
DNA repair and recombination proteins [BR:
mhh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MYM_0317 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
MYM_0317 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
PhoH
Viral_helicase1
NAT10_TcmA_helicase
AAA_12
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
AEX14092
LinkDB
All DBs
Position
399960..402215
Genome browser
AA seq
751 aa
AA seq
DB search
MNLDKNSQLQNDILSGLNTNQKAAVLENEHHLRIIAGAGTGKTSVLTKKIAYLIAAKITT
AKKILALTFTNKAANEMKERVKNVIGADANETKIFTFHSLCNLILKIESQQFKKIKEFEN
LDKNFNIIDERDQKKILKDVYEKLQFSLSNEEIPNFRKAIDFISYVKNKELTFEQIQANA
QNSTEKKLVKNYKNYVYYMNKANVVDFDDLQIFVKVLFTQIPEIAKKWSSFFDFVLVDEF
QDTSSIQYEIVKLLISKKTKLIVVGDPDQTIYSWRGADVNLILNLEKDFDNLISITLNRN
YRSSQTILDAANILISNNKNRIKKNLVSNQDKQELEIKFFDAANQNVEFSWVISEINNLR
KNKVQLKNIAILYRQHFYAKHLEDELFKENIAYKIVGNTSFNSKKEIRDAINFLRVINDG
NVVAFSQVINIPSKKIGPTVLNKLTYLAEKYNKNLYDFLIDFYSKKIKFVNDKEDKIPLS
KENQKKLTHLLSYIKAYRKLFEQGHKKFDELLKAFLQQIDYLSSFKHETGERKEAQETLE
KFYASLRVWQKHKPNKKLRDYLDDSVLSSDLDNDYEANTSISLMTIHAAKGLEFQNVFLI
GMSEGVFPTKKTLESYDQELLEEERRLAFVAITRAKERLFISYSRSNFLSASKTNNYRPT
PISCFVSEMKIKSEQILSFSRITLKGDLNYTKSENTDFYQGDLVHHIKFGQGIVLNVESE
TIDVEFFNLEETQKIKTILKNHKSIEKITKS
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgaacttagataaaaattctcaactgcaaaatgatattcttagtggactaaacactaat
caaaaagcagcagtgcttgaaaatgaacatcatttgagaattattgccggagctggaacc
ggaaaaaccagtgttttaactaaaaaaattgcttatttaattgctgccaaaataaccacg
gcaaaaaaaattttagctcttacttttactaataaagctgcaaatgagatgaaagaaagg
gttaaaaacgtaattggtgctgatgctaatgaaactaaaatttttactttccactcacta
tgtaatttaattttaaaaattgaatcacaacaatttaaaaaaataaaagaatttgaaaat
ctagataaaaactttaacatcattgatgaaagagatcagaaaaaaattttaaaagatgta
tacgaaaagcttcaattttctttatcaaatgaagaaatccctaattttagaaaagcaatt
gattttataagttatgtaaaaaataaggaactgacttttgagcaaattcaagccaatgct
caaaattctacagagaaaaaacttgttaaaaattacaaaaactatgtttactacatgaac
aaagcaaacgtagttgattttgatgatttgcaaatctttgttaaagtcttatttactcaa
attccagaaatagccaaaaaatgatcttctttttttgactttgttttagttgatgaattt
caagatacctcttcaatacaatatgaaatagttaaactattaatttcaaaaaaaaccaaa
ttaatagttgttggtgatccagatcaaaccatttattcatgaagaggagcagatgttaat
ttaattttaaatcttgaaaaagactttgataatttaatttcaataacattaaatagaaac
tacagatctagtcaaacaattctagatgcagcaaatattcttatttccaataacaaaaac
agaatcaaaaagaatctagtttcaaatcaagacaaacaagaattagaaattaaatttttt
gacgctgctaatcaaaatgttgagttttcttgggttattagcgaaattaataatctaaga
aaaaataaagttcaacttaaaaacattgctattttatatagacaacacttttatgccaaa
cacttagaagatgaactttttaaagaaaatattgcttataaaattgttggaaatacttca
tttaattctaaaaaagaaatcagagatgcaattaattttttaagagtaatcaatgatgga
aacgttgttgcttttagtcaagtaattaatattccttcaaaaaaaattggtccaacagtt
ttgaataaattaacttatttagctgaaaaatataacaaaaatctttatgattttctaatt
gatttttatagtaaaaaaattaaatttgtcaatgataaagaggataaaattccactttca
aaagaaaatcaaaaaaaacttactcatctactttcatacatcaaggcatatcgcaaacta
tttgaacaagggcataaaaaatttgatgaacttttaaaagcatttttacaacaaattgat
tatcttagctcatttaaacatgaaaccggcgaaagaaaagaagctcaagaaactttagaa
aaattctacgcttctttgcgtgtgtgacaaaaacataaaccaaataaaaaactaagagat
tatttagatgatagtgttttatcttcagatttagataacgattatgaagcaaatacttca
atttcactaatgacaattcacgctgctaaaggacttgaatttcaaaatgtttttttaata
ggtatgtctgaaggagtttttcctactaaaaagactttagaaagctatgatcaagaactt
ttagaagaagaaagaagactagcttttgttgcaattactagagctaaagaaagacttttt
atctcttattcaagatctaattttctttcagcaagtaaaacaaacaattatcgaccaaca
ccaattagttgctttgtttctgaaatgaagataaaatctgaacaaattttaagttttagt
agaattaccctaaaaggtgatttaaactatacaaaaagcgaaaatactgatttttatcaa
ggagatttagttcatcacatcaaatttgggcaaggaattgttttaaatgttgaaagtgaa
acaattgatgttgaattttttaatttagaagaaacacaaaaaataaaaactatcttaaaa
aatcataaatccattgaaaaaataactaaatcatag
DBGET
integrated database retrieval system
