Mesomycoplasma hyorhinis GDL-1: MYM_0338
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Entry
MYM_0338 CDS
T01730
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
mhh
Mesomycoplasma hyorhinis GDL-1
Brite
KEGG Orthology (KO) [BR:
mhh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhh03032
]
MYM_0338 (gyrB)
03400 DNA repair and recombination proteins [BR:
mhh03400
]
MYM_0338 (gyrB)
Enzymes [BR:
mhh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MYM_0338 (gyrB)
DNA replication proteins [BR:
mhh03032
]
Prokaryotic type
DNA Topoisomerases
MYM_0338 (gyrB)
DNA repair and recombination proteins [BR:
mhh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MYM_0338 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AEX14113
LinkDB
All DBs
Position
complement(426888..428810)
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AA seq
640 aa
AA seq
DB search
MSNQNYEAESIQTLEGLEPVRKRPGMYIGGTGILPLHHLIWEIVDNAVDEALAGFANTIT
VEITTDGYVKVSDNGRGIPVGIHPKHNVSAAEVVLTVLHAGGKFDGSSYKVSGGLHGVGA
SVVNALSANLKVWIKRDGKLYFQEFVDGGKKIDDLKVIDTVPDFSTGTTIMFKPDFTIME
VNDFRLDIILDRLKQTAYLTKNLKFIVKDQRNNFEKEFLFAGGIIDYVSELTKGSEKVHD
NIIYSEGEISTDQYHTKAEIALQYVKEDRSEVLAYTNNIYNREGGTHETGLFDALSRILN
NYALENKFFKSDQEKFSREDIKDGMYVVVSIKHSNPIFEGQTKGKLNNKEVRSVVNKIFS
EVFERFLAENPDQARKIIERNLLSQKARKAAESAREAIKRKSPFEINSLPGKLADCTTKD
AQISELYIVEGNSAGGSAKMGRDRHFQAILPLRGKVINSQKTNFEKVLKNEEILSLITAF
GTGIGAEFNINKIRYYKIIIMTDADSDGSHIRTLLLTFLYRFFKPLIEYGFVYIAQPPLY
KISANKKVVYAYSDKQKEQIIEQEFSNQKVSIQRYKGLGEMNPDQLWETTMDPKTRKMIQ
VQIQDAIIASQVFEELMGTDVAPRKLFIEENAKYAKNLDF
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatcaaaattacgaagcagaaagcatacaaacattagagggactcgaaccagta
agaaaaagacctggaatgtatataggtggaactggaattttaccattacatcatcttatt
tgagaaatagttgataacgcagttgatgaagctttagctggatttgcaaatacaattaca
gttgaaatcacaacggatggttatgtaaaagtctcagataatggtcgtgggattccagtt
ggtatacatccaaaacataacgtctcagcagctgaagttgttctaactgttttgcacgct
ggtggaaaatttgatggaagttcttataaagtttccggtggtcttcatggagttggtgct
tcagtagttaatgctttaagtgctaatttaaaagtatgaattaaaagagatggcaagctt
tattttcaagagtttgtagatggtggaaaaaaaatagacgatctaaaagttatagacaca
gtacctgatttttcaacaggtactaccattatgtttaaaccagattttactattatggaa
gtaaatgattttcgtttagatattattttagatcgactcaagcagactgcttatcttaca
aaaaacttaaaatttattgtcaaagaccaacgaaataatttcgaaaaagaattcttattt
gctggtggaataattgattatgtaagtgaattaacaaaaggttctgaaaaagtgcatgat
aatattatttactcagaaggtgagatttcaaccgatcaatatcacacaaaagctgaaatt
gctctacaatatgtaaaagaagatcgttctgaagttctagcttatacaaacaacatttac
aaccgtgaaggtggaacacacgaaacaggattgtttgatgctttgtccagaattttaaat
aactatgctttagaaaataaattttttaaatcagatcaagaaaaattttctcgtgaagac
attaaagacggaatgtatgttgttgtttcaattaaacattcaaatccaatttttgaaggt
caaactaaaggaaaattaaacaacaaagaagttcgttctgtagttaacaaaattttttct
gaagtatttgaaagatttttagctgaaaatccagaccaagcaagaaaaattattgagcgt
aacttgctttcacaaaaagcaagaaaagcagctgagtcagctcgtgaagcgattaaaaga
aaatcaccttttgaaattaattcattaccaggaaaattagctgattgtactacaaaagat
gcacaaattagcgaactttacatagttgagggtaactcagctggtggaagcgctaaaatg
ggtcgtgatcgtcattttcaagctatattgccacttagaggtaaagtaattaattcacaa
aaaactaattttgaaaaagtgcttaaaaacgaagaaattctctctttaattaccgctttt
ggtacaggtattggtgcagaatttaatatcaacaaaatccgttattataaaatcatcatt
atgaccgatgccgattctgatggttcacatattagaactttactcttgactttcttatac
agatttttcaaaccattaattgaatacggttttgtttacatagcacaacctccactttac
aaaatttcagcaaataaaaaagttgtttatgcatattcagataagcaaaaagaacaaata
attgaacaagaattttcaaatcaaaaagttagcattcaaagatacaaaggtcttggagag
atgaatccagatcaactctgagaaaccactatggacccaaaaacaagaaaaatgattcaa
gtacaaattcaggatgcaattattgcttcacaagtttttgaagaattaatgggaacagat
gtagctcctagaaaattatttattgaagaaaatgcaaaatatgcaaaaaacctagacttt
tag
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