Mesomycoplasma hyorhinis GDL-1: MYM_0515
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Entry
MYM_0515 CDS
T01730
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mhh
Mesomycoplasma hyorhinis GDL-1
Pathway
mhh03030
DNA replication
mhh03430
Mismatch repair
mhh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MYM_0515 (dnaE)
03430 Mismatch repair
MYM_0515 (dnaE)
03440 Homologous recombination
MYM_0515 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhh03032
]
MYM_0515 (dnaE)
03400 DNA repair and recombination proteins [BR:
mhh03400
]
MYM_0515 (dnaE)
Enzymes [BR:
mhh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MYM_0515 (dnaE)
DNA replication proteins [BR:
mhh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MYM_0515 (dnaE)
DNA repair and recombination proteins [BR:
mhh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MYM_0515 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUSP
Motif
Other DBs
NCBI-ProteinID:
AEX14266
LinkDB
All DBs
Position
complement(597769..600708)
Genome browser
AA seq
979 aa
AA seq
DB search
MQKLINLHTNTEYSFLQSTIKISSLIEYAKQHQLKHLVITDRDNMFGVAKFYNECKANNI
NPIIGLDLEIKSFRFILIAKNYQGFLHLSLLSSKKMSFKEIEIEELDNENIIVIDHPKLG
LYSKTKKMLEFSNYFVHSNDSKIANSVYVQTRNVLYASEEKYLKILHKIADSSEKDEAVD
FIDFEMWYEQVDEQIIQRTNFLVENILIEFPEANMILPDFKNEANLNPDEFLQQLLEKQV
AKKKAEFKNFPNFKERLVYEFNIIKSLKFSNYFLIIWDFLRWARKNNILIGPGRGSSSGS
LISYLLNITQVNPLKFDLIFERFLNPKRISMPDIDIDIQDNRRDELIQYIQQKYGYENTA
LIITFSTFGAKMAFADVAKKLKNVSPTDVLAITKHIPFGLSLEQAYKTNANFRAYVEKQD
NNGNFLYKEIFEIAKFLEGMPRQSGTHAAGIVIADKPLYNYVPTLISKDKYNQTQFSAEF
LEQFSLLKIDLLGLKNLTVVKGIINSINQHSNLNFNFNSIPIFDKGTNELLTRGKTVGIF
QLKSPGMANTLRKVGISSIDDVVAVISLFRPGPIKNIPLYAQRKKNEADYEIISQEYNDI
LKSTYGIIIYQEQIMQICQTIAGFDFATSDLIRRAISKKEAKKLYKAKQLFIQGGLNKGY
SAVVLEKIFQQIEYFAEYGFNKSHAVAYATLAYKMAYLKQNYPLEFYSFLITNEEGSQTN
IAKFIKEAQPAIKFKKPNINISTTSVVYERKTSTIYLPLILIKGLGSVACQKILEERNKN
GLYKDFLDFVIRMKIINISNTIITLLINSGTLSEFGNIPTLLENLVTAESYKICILEDEN
KNLYCDYSLIPGKFELEIKEDNLELTIENEEKLLGMSFSSFDQNIDLKNPVLLSELSLNV
EYRMVLYVKKVANLTAKTGAWMKKITLTDFQSPDQDIWLFGSKVTFFEAVKEKQYYEFLI
IKIKDKLILQNHLKEMRYD
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaattaataaatctacatacaaatacagaatatagttttttacaatcaacaata
aaaatttcatctttgattgaatatgcaaagcaacaccaactcaaacatttagtaattaca
gatagagataatatgtttggagttgcaaagttttacaatgaatgcaaagcaaataatatt
aatccaattattggtttggatttagaaattaaaagctttcgatttattttaatagctaaa
aattatcaaggttttcttcatttgtccttattaagttctaaaaaaatgtcttttaaagag
attgaaatagaagaacttgataatgaaaatattattgttattgatcatccaaaattaggt
ttatatagtaaaacaaagaaaatgcttgaatttagcaactattttgttcattctaatgat
tcaaaaatagctaattctgtttatgttcaaactagaaatgtattgtatgcgtcagaagaa
aaatacttgaaaatccttcataaaatagcagattcttctgaaaaagatgaagctgtagat
tttattgattttgaaatgtgatatgaacaagtagatgagcaaattattcaaagaacaaat
tttttagttgaaaacattttaatcgagtttccagaagctaatatgatactgccggatttt
aaaaatgaagcaaatttaaatcccgatgaatttttacaacagcttctagaaaagcaagtg
gctaagaaaaaggcagaatttaaaaattttcctaactttaaagaaagattagtttatgaa
tttaacatcattaaatctttaaagttttcaaattactttttaattatttgagattttctt
agatgagctagaaaaaataatatcttaattggcccaggaagaggatcttcttctggttca
ttaatttcatatttgcttaatataacacaagttaatccacttaaatttgacttgattttt
gaacgttttttaaatccaaaaagaatttcaatgccagatattgacattgatattcaagat
aatcgaagagacgaattgattcaatatattcaacaaaaatatggctatgaaaacacagct
ttaattataactttctctacttttggtgccaaaatggcattcgctgatgtagctaaaaaa
ttaaaaaatgtgtcaccaacagatgttttagcaattactaaacacattccatttggtctt
agtttagaacaagcttacaaaacaaatgcaaattttagagcttatgtagaaaaacaagac
aataatggaaattttttatacaaagaaatttttgaaattgctaagtttttagaaggaatg
ccacgtcaatcaggaactcatgcagctggaattgtaattgcggataagcctttatacaat
tatgttcctactttaatttctaaagataaatataatcaaactcaatttagtgctgaattt
ttagaacaattttctttattaaaaattgatcttttaggtttgaaaaatttaacagttgtc
aagggaataattaattccattaaccagcactcaaacctaaattttaattttaattcaatt
ccaatttttgacaaaggtacaaatgaattgctaacaagaggaaaaacagttggtattttt
caacttaaatctccagggatggctaacactttaagaaaagttggaattagtagtattgac
gatgttgttgctgtaatttctctttttagacctggacctattaaaaacattcctttatat
gcacaaagaaagaaaaatgaagcagattatgaaataatttcacaagaatataacgatatt
ttaaaatctacttacggaataattatttatcaagaacaaattatgcaaatttgtcaaact
atagctggttttgattttgcaacttcggatttaattcgtagagcaatttcaaaaaaagaa
gcaaaaaaactatataaagcaaagcaattatttattcaaggtggtttaaataaaggttat
tcagctgttgttttagaaaaaatattccaacaaatagagtattttgcagagtacggtttt
aataaatcacatgctgttgcttatgctactttagcttataaaatggcttatttaaaacaa
aattatcctttagaattttattcttttttaataacaaatgaagaaggttctcaaaccaat
atagctaaatttattaaagaggcacaaccagctattaaatttaaaaaaccaaatattaat
atttcaacaacatctgtagtttatgaaagaaaaacatcaacaatttatttaccactgatt
ttaattaaaggtttaggaagtgttgcttgtcaaaaaattcttgaagaaagaaacaaaaat
gggctatataaagattttcttgattttgtaattaggatgaaaataattaatatttccaat
acaataattacacttttaattaattcaggaacattaagtgaatttggaaatatcccaacg
ttattagaaaatttagtaaccgctgaatcttataaaatttgtattttagaagatgaaaat
aaaaatctttattgtgattactctttaattcctggcaaatttgagcttgaaataaaagag
gataatttagaacttactatagaaaatgaagaaaaactattgggaatgagctttagttca
tttgatcaaaatatagatttaaaaaatccagtattattatcagaattaagtttaaatgtt
gaatatcgtatggtgctttatgttaaaaaagttgctaacctaacagcaaaaacaggtgct
tgaatgaaaaaaattacattaactgattttcaatcaccagatcaagatatttgacttttt
ggaagtaaagtaactttttttgaagctgttaaagaaaaacaatattatgagtttttaatt
ataaaaattaaagataaattaatattacaaaatcatttaaaggaaatgagatatgactaa
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