Mesomycoplasma hyorhinis GDL-1: MYM_0638
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Entry
MYM_0638 CDS
T01730
Symbol
polC
Name
(GenBank) DNA polymerase III polC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
mhh
Mesomycoplasma hyorhinis GDL-1
Pathway
mhh03030
DNA replication
mhh03430
Mismatch repair
mhh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MYM_0638 (polC)
03430 Mismatch repair
MYM_0638 (polC)
03440 Homologous recombination
MYM_0638 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhh03032
]
MYM_0638 (polC)
03400 DNA repair and recombination proteins [BR:
mhh03400
]
MYM_0638 (polC)
Enzymes [BR:
mhh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MYM_0638 (polC)
DNA replication proteins [BR:
mhh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MYM_0638 (polC)
DNA repair and recombination proteins [BR:
mhh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MYM_0638 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
HHH_6
RNase_H_2
HHH_3
T2SSK
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AEX14368
LinkDB
All DBs
Position
complement(726399..730772)
Genome browser
AA seq
1457 aa
AA seq
DB search
MNDNQSFISFCKNINYVIPSYLLETQASLEEIITKDSKKYILKIKSLNMFKFQDFINFQQ
KIQQSFFQKFNYKILFEYEQQYCEKEEFLKYINFIYLTLYKKEDFFNQFRLQNKAREFWF
YFMDEEIAKDLEAKKDKILSLLKRFGLSFIDINFVVDYENIKKQALAFQEFLTNQKEENL
KQAQKEAQQQVKPLKTFSRTKFSKSKKYVPLKLKEVRTANEQFIAIQGQIYKLEDKVTKN
KNVLRMINISDYEEAIIINHFCNPENFLDLKIGDFIHVYGEITKDFYTRDIIVKSDKIEK
IDNFFPIRVDEANTKRVELFARTKMSTMDGVTNAQDYVKIAKLLGHSAIGISDLESVQAF
PDFYFACKNAKIKAIYGSTFSTTHSKIFKVLNLRQNQDLEHARYVVFDLETTGLSPKFNE
LIEFGAVVWQNGQTLEKHEFLIKPKEKIPSYISDLTGITNQMIENEAISVEEAAIKIKQI
FQNSILVAHNARFDYGCLVEFFKELELYELEQPVIDTLEVSRFLAPTQKRHNLKELAKNA
SIHYDETESHRGGYDAEVLAKVWDQFLIKLIEKNIKDLNSLNQVGSNILDFKRRGLFSKE
IRVIVKNQQGLKELFKLVSLSNTDNFLSKPLLFYDKILPSNNLLWGTSGLDSQLMEILFY
NHHNDLETFIKKFDFIEIPTPSSFIHLIKRNKIKKEDIIKGLKLVIELARKHKKLIVASS
EPRYINKEDKIFHLVYIYAKGVGGKPHNLFGGDTDKKEDHIFPTKYFMTTQELKAEFAFL
EDQDLIDEIVVRNPNKIADLVEQVQVIKDKLYPPKFDDSASKIKHLVYQKAHEKYGENLP
DQIALRIEKELNPIIDNGYDVVYWISKELVDKAKSEGQKVGSRGSVGSSVVAYLIGITEV
NPLEPHYVCNQCKNVKFSTDSNVLSGFDLKDKKCKTCNILYDKDGQNIPFETFLGFKADK
VPDIDLNFAGDFQVQTHNYIRELFGEKFTFRAGTILGYAEKSAFSLAKKLNEIQTRLYLN
EHPNEYEFSMYSNTFLDFLATKTSGVKKTTGQHPGGIIVILNDLEIEEFTPINFPANDDN
SDWKTTHFDFENIHDNVLKFDLLGHDDPIMVRELEKLTNTKVENIPKSDPKIIKLFSSLE
PLNIDSKDLPGEQNGARGLPEFGTSFVRRMLNTARVESFSDLIKVSGLSHGTNVWQDNAE
ALISQHNLTLRDVISCRDDIMLYLINKGVDSLVSFNIMESVRKGKSITVEQQQILENHNV
PIWYIESLKKIKYMFPKAHAAAYVLMAWRITYYKLYYPLAFYSVYFSIRIDFKNIDALLL
PKQQLSSQIMALKQRENSKKEDKLSEKEKKLIPILEVAEELKARGFEIEKINLNLSQATQ
WVINEENNSLIPPFSSLDGIGEANAAKIIAARTEKSFSSIEDFEKRAGVNSTVIKKLKDM
GVFKDLSETHQITLFDY
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atgaacgataaccaatcttttatctctttttgcaagaatattaattatgtcattccaagc
tatttacttgaaacccaagctagtttagaagaaataatcacaaaggattcaaaaaaatat
attttaaaaataaaaagtttgaatatgttcaaattccaagattttattaattttcagcaa
aaaattcagcaatctttttttcaaaaatttaattataaaattctttttgaatacgaacaa
caatattgtgaaaaagaagaatttttaaaatatattaattttatttatcttactttgtac
aaaaaagaagacttttttaatcaatttcgtttacaaaataaagcacgtgaattttgattt
tattttatggatgaagaaattgccaaagatttagaagcaaaaaaggataaaatactttct
ttattaaaaagattcggtttatcttttatcgatatcaattttgtagtagattacgaaaac
attaaaaaacaagctttagcttttcaagagttcttaaccaaccaaaaagaagaaaatctt
aaacaagctcaaaaagaagcacaacaacaagtcaaacctttaaaaacatttagcagaaca
aaattttctaaatcaaaaaaatatgttcccttaaaacttaaagaagttagaacagcaaat
gaacaattcattgctattcaaggtcaaatttacaaacttgaggacaaagttaccaaaaat
aaaaatgttttaagaatgataaatattagtgattatgaagaagcaataattattaatcac
ttttgcaatccagagaattttttggatttaaaaataggtgattttattcatgtatatgga
gaaattactaaagatttttacacaagagatattattgttaaatccgataagatagaaaaa
attgataattttttccctatcagagttgatgaagcaaatacaaaaagagttgaactattt
gcaagaaccaaaatgtcaacaatggatggagttacgaacgctcaagattatgtgaaaata
gcaaaattattaggacatagtgctattggaatttctgatcttgaatctgttcaagctttt
cctgatttttattttgcttgtaaaaatgcaaaaattaaagctatttatggttcaactttt
tctactactcattcaaaaatttttaaagttttaaatcttagacaaaatcaagatttagaa
catgcaagatatgttgtttttgacttagaaactacaggcctttcacctaaatttaatgaa
ttaattgaatttggtgctgttgtttgacaaaatggacaaactttagaaaagcatgaattt
ttgataaaacctaaagaaaaaattccttcatatattagcgacttaactggaattacaaat
caaatgatagaaaatgaagcaatttcagttgaagaagcagctatcaaaatcaagcaaatt
tttcaaaatagtattttagtagcacataacgcaagatttgattatggatgtttagttgag
ttttttaaagaacttgaattatatgaacttgaacaaccagtaattgatactttagaagtt
agtaggtttttagcccctacacaaaaaagacataatcttaaagaattggcaaaaaatgct
tcaattcattatgatgaaaccgaatcgcatagagggggttatgatgctgaggttttagca
aaagtatgagatcagtttttaattaaattaatagaaaaaaacattaaagatttaaatagt
ttgaatcaagttggttcaaatattttggattttaaaagaagaggtcttttttctaaagaa
attagagttattgttaaaaatcaacaaggattaaaagaacttttcaaactagttagcttg
tcaaatacagataattttctttctaaaccgcttcttttttatgacaaaattctaccttca
aacaatttattatgaggaactagtggtttagattcacaattaatggaaattcttttttat
aatcatcacaatgatttagaaacatttattaaaaaatttgactttatagaaattccaact
ccttcttcttttattcaccttattaaaagaaataaaataaaaaaagaagacattatcaaa
ggattaaaattagttattgaactagctagaaaacacaaaaaacttattgttgcttcttca
gagccaagatatattaataaagaagacaaaatttttcatttggtttacatttatgcaaaa
ggtgttggaggaaaacctcataatcttttcggtggtgatacagataaaaaagaagatcac
atttttcctacaaaatattttatgacaacacaagaattaaaagctgagtttgcattttta
gaagatcaagatttaattgatgaaattgtagtaagaaatccaaacaaaatagctgattta
gtagaacaagtacaagtaattaaagacaaactttatccaccaaaatttgatgattctgct
tcaaaaataaagcatttagtctatcaaaaagcacacgaaaaatatggagaaaatcttcca
gatcaaatagctttacgaatcgaaaaagaactaaatccaattattgacaatggatacgat
gttgtttattgaatttcaaaagaattagtggataaagctaaatcagaaggtcaaaaagtt
ggctctcgtggttcagttggttcttctgtcgttgcttatttaatcgggataacagaagta
aatccacttgagccgcactatgtttgcaatcagtgcaaaaatgtaaaattttcaactgat
tcaaatgtgttatctggctttgatttaaaagacaaaaagtgtaaaacttgcaacatttta
tatgataaagatggtcaaaacattccttttgaaacttttttaggattcaaagctgataaa
gtaccagatattgatttaaattttgctggagactttcaagttcaaacacataattacatt
agagaattatttggagaaaaatttacttttagagctggaacaattttaggttatgcagaa
aaatcagctttttcattagcgaaaaaactaaatgaaattcaaacacgattgtatttaaat
gaacatccaaatgaatatgaattttcaatgtattcaaacacttttttagattttttagct
acaaaaacaagcggagttaaaaaaactacaggacaacatccaggtggaattattgttatt
ttaaatgatttagaaattgaagaattcacacctattaactttccagctaatgatgataat
tcagattgaaaaactactcattttgactttgaaaatattcatgataatgttctaaaattt
gatcttctaggacatgatgatccaattatggttcgtgaattagaaaaattaacaaataca
aaagttgaaaatatacccaaatcagatccaaaaataattaaacttttttcttcattagaa
cctttaaatatagattcaaaagaccttccaggagaacaaaatggcgcacgaggattacct
gaatttggaacctcttttgttcgtagaatgcttaacacagcaagagtagaatcattttca
gatttaataaaagtttcaggtctttcgcatggaactaatgtttgacaagataatgcagaa
gccttgatttcacaacataatttaactcttcgtgatgtgatttcttgtagagatgatatt
atgctttatttaataaacaaaggtgttgattctcttgtttcttttaacattatggaatca
gttagaaaaggaaaatcaataacagttgaacaacaacaaattctcgaaaaccataatgta
ccaatttgatatattgaatcacttaaaaaaattaaatatatgtttcctaaagcacatgcc
gcagcttatgttttaatggcttgaagaattacatattacaaactttattatcccttagct
ttttattctgtttatttttctattagaatcgattttaaaaatattgatgctttactttta
ccaaaacaacaattatctagtcaaataatggctttaaaacaaagagaaaacagcaaaaaa
gaagacaaattatctgaaaaagagaaaaaattaattcctattttagaagtagctgaagag
ttaaaagctcgtggttttgaaatagaaaaaattaacttaaatctttcacaagcaacacaa
tgagtaattaatgaagaaaataattcactaattccacctttttcttcactagatggaatt
ggagaagcaaatgcagctaaaattattgccgcaagaacagaaaaatccttttcttctatt
gaagattttgaaaaacgtgctggtgtgaattcaacagttattaaaaaattaaaagatatg
ggagtttttaaagatcttagtgaaactcaccaaattactttgtttgattactaa
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