Mesomycoplasma hyorhinis GDL-1: MYM_0700
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Entry
MYM_0700 CDS
T01730
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
mhh
Mesomycoplasma hyorhinis GDL-1
Pathway
mhh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mhh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MYM_0700 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhh03400
]
MYM_0700 (uvrB)
DNA repair and recombination proteins [BR:
mhh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MYM_0700 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MYM_0700 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
ResIII
UvrB
DEAD
UVR
AAA
AAA_30
Helicase_C_2
Kinesin
AAA_22
AAA_7
Microtub_bd
SWI2_SNF2
DUF87
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AEX14424
LinkDB
All DBs
Position
complement(790364..792325)
Genome browser
AA seq
653 aa
AA seq
DB search
MFKLVSNFQPTGDQPKAIKALVDGIKNHKDHQVLLGVTGSGKTFTMANVIAQLNRPVLIL
SHTKTLASQLYTEFKEFFPENRVEYFVSYFDFYRPEAYLPAKDVYIDKTSQTNWDLEAMR
MSALNALTLRRDTIVVSSVAAIYGSYNPKEYKQHFLNLELNQELKPSDFAIELVKIQYSR
NQVDTVPGSFSAKGDVFIISPAWTDKYLIKIEFFGNIIEKISKIHPVDKKIIQTFTSYTI
FPASAYTLSPNTIQTAIKTILTELDFQLNYFEKEGKLLEKQRLNERVLNDVDSLNNFGFC
KGIENYARHIDQREAGEQPYSLLDYLPEDALIFIDESHEMITQLNRMYKGDRSRKLSLVN
YGFRLPSALDNRPLKFEEFEKFKQPKIYVSATPSNYEIDKADGEVIHQLIRPTGLLDPVI
EVRPTHSQIDEIYDLLQEQKSKNERTIILTTSKRSAEELSRYLESKKQKVYYIHSTFTTF
ERDDILIKLRKGIYDAIIGINLLREGIDLPEVSLVIVLNADEESFFRSKTSLTQFVGRAA
RSNHGKAIFFADKISKSMAATIADNQRNRAIQHQYNLDNNITPKPVIRPIIQQIREKDQN
KIISLIHNKNKETKAEKDKLIASLRKQMKDSAREENYELAIELQQVIAELEHS
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaattagtttcaaattttcaaccaacaggagatcaaccaaaagcaattaaagct
ttagtggatggaataaaaaatcacaaagatcatcaagttcttttaggtgttacaggttca
gggaaaacattcacaatggccaatgtaattgcacaattaaatcgccctgttttaatactt
tctcatactaaaactttagcttcacagttatatacagagtttaaagagtttttccctgag
aatagagttgaatattttgtttcatattttgatttttatcgtccagaagcatatttgcca
gcaaaagatgtttacatagacaaaacaagccaaacaaactgagatttagaggcaatgcgt
atgtcagctcttaatgcgcttactttaagaagagatacaattgttgtttcttctgtagct
gctatttatggttcttataatcctaaagaatataaacaacattttcttaatttagaacta
aatcaagaactaaaaccttctgattttgcaattgaattagttaaaattcaatattcaaga
aaccaagttgatacagttcctggttcttttagtgctaaaggtgatgtttttattattagt
cctgcttgaactgataagtacttaataaaaatcgaattttttggaaatattatcgaaaaa
atttctaaaatccatccagtggataaaaaaataattcagacttttacaagctatacaatt
tttccagcttcagcttatactttatcacctaatacaattcaaactgcaataaaaactatt
ttaacagaattagattttcaactaaattactttgaaaaagaaggaaagttattagaaaaa
caacgtttgaatgaaagagttttgaatgatgttgattcactaaataattttggtttttgc
aagggaattgaaaactatgcaagacacatagaccaaagagaggcaggagaacaaccttat
agtttattagactatttgcctgaagatgcacttatttttatagatgaatctcatgaaatg
attacacaattaaatagaatgtataaaggtgatagatctagaaaactcagtttagtaaat
tatggttttagattaccttctgcactagataatcgacctttaaaatttgaagaatttgaa
aaatttaaacaaccaaaaatttatgtttcagcaacaccttcaaattatgaaattgataaa
gcagatggcgaagtaattcatcaattaattagacctacaggacttttagatccagttatt
gaagttcgtccaacacattcacaaattgatgaaatttacgatcttttacaagaacaaaaa
agtaaaaatgaaagaactataattctaacaacaagcaaaagatcagctgaagaattaagt
agatatctagaaagtaaaaaacaaaaagtttattatattcattcaacatttacaacattt
gaaagagatgatattttaattaaattaagaaaaggtatttatgatgcaatcatagggatt
aatcttcttagagaaggaattgatctaccagaagtttctttagttatagttttaaatgct
gatgaagagtctttttttagatctaaaacttcattgactcaatttgttggtagagcagct
agaagtaatcatggaaaggctattttctttgctgacaaaataagtaaaagcatggcagcc
acaattgctgataatcaaagaaacagagcaattcaacaccaatataatctagataataac
ataaccccaaagcctgttatcagaccaataattcaacaaattagagaaaaagatcaaaac
aaaattatttctttaattcataataaaaacaaagaaactaaagcagaaaaagacaaatta
attgcttcattgagaaaacaaatgaaagactctgctagagaagaaaattatgaattagca
atagaacttcaacaagtaatcgctgaattagaacattcttaa
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