Methanothrix harundinacea: Mhar_0294
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Entry
Mhar_0294 CDS
T01990
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mhi
Methanothrix harundinacea
Pathway
mhi03420
Nucleotide excision repair
mhi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mhar_0294
03430 Mismatch repair
Mhar_0294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhi03400
]
Mhar_0294
Enzymes [BR:
mhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mhar_0294
DNA repair and recombination proteins [BR:
mhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mhar_0294
MMR (mismatch excision repair)
Other MMR factors
Mhar_0294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
AAA_16
AAA_11
AAA_22
ResIII
DEAD
ATPase_2
SNF2-rel_dom
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AET63681
UniProt:
G7WLT8
LinkDB
All DBs
Position
304900..306801
Genome browser
AA seq
633 aa
AA seq
DB search
MNIQLSETQRKIVEHGEGPLLVVAGPGSGKTRVLTERVRRLLNEDTGHFRILALTFTNKA
ANEMKERLSEIPNIEKRAFIGTLHSFCMEVLANRGKPVGIDELPNIFESYQDRKQVLFQA
AMANPYLRHKLNIILDANTQDRLLNRWLDMISSAKNNLFVPEMMDNETDRQVYEAYNNGL
RVSYAIDFDDLLLLTYRLFQERPKIADFYRRQYRYICIDEGQDLNEAQYQVISALCGLEH
RNVMIVGDKKQAIFVWNGANPKYLDQFERDFGAKKIFMNDNFRSSQVVVNAAKSLVSEYE
VEGQLPIAGSIELMEGIDEQHEARLVLDYIQNLLNEGHRDVEGPITLERCALLGRNRYVL
SAVEDELNKRHWPYYKQLSAQQESESSLIQDFELCLRLLANPRDRLHFSMLIARWDMRED
ASDFGQHVSDGLRLLSALKRRTSDNDRLAVILALESMDWTEENFKFKNAMEYLYDYSETK
ESQEERALIIEDIRTWQKHWNYYLRSQPGGYHTLTSFLGQVALGTTQQPRQEGLALLTVH
SAKGLEFDVVVVMGMAEGTFPDYRARDGPALEEEMRDAFVAVTRSKRLLAFSYPRTKLMP
WGSERKQRPSRYLSIIGLIKPDNPRGPNPGKIV
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
gtgaatattcaactttctgaaacacaacgtaaaattgtcgaacatggtgaaggcccttta
cttgtggtcgctggcccgggctctggaaagacgcgagttctaactgaacgtgttcgaaga
ctgttaaatgaagatacgggtcatttccgtatattggctttgacctttacaaataaagct
gcaaatgagatgaaagaacgattatcggagatcccaaatatagagaaacgtgcttttatt
ggcacactccacagtttttgtatggaagttttggccaatagaggaaaaccagtaggaatc
gatgagctgcccaatatctttgaatcgtaccaggatcgcaaacaagtactatttcaagca
gctatggccaatccatatctacggcataaactaaatattattttggatgcaaacactcaa
gaccgacttctaaaccgctggcttgatatgatttcttcagcaaaaaataatctatttgtt
cctgagatgatggataatgaaactgataggcaagtttatgaggcatataacaacggtctt
cgtgtgtcatatgctatagattttgacgacctattgttgctcacatatcgcttattccaa
gagcgtccaaaaatagcagatttctatcggcgccaataccgttacatttgcatagacgag
ggacaagatctaaacgaagcacagtaccaagttatcagtgctctttgcggtttagaacat
cgaaatgtaatgatagtaggagacaaaaaacaggctatttttgtttggaatggagcaaat
ccaaaatatctcgatcaatttgaacgcgattttggtgcgaaaaagatctttatgaacgat
aacttccgatcttcacaggttgtcgtcaatgcggcaaaatccttagtttcagagtacgaa
gttgaagggcaacttccaattgcagggtcaattgagttaatggagggaatagatgagcaa
catgaagcacgtcttgtcctcgattatattcaaaatctccttaatgaaggacatcgggat
gtagagggtcccataactttagaacgctgtgcattactgggcagaaataggtatgtttta
tctgcggttgaagacgaattaaataaacgccattggccctactacaaacaactttcagca
caacaagaaagcgaatcgagcctcattcaggattttgaactttgtttgcgtctactggca
aatccccgtgatcgcttacactttagtatgttaattgcgcgttgggatatgcgcgaagat
gcctccgatttcggccaacatgtcagtgatggattgcgcctgttgtctgccttaaagaga
cgaacgtctgataatgatcgattagctgtaattttggcactagaatcgatggactggacg
gaagaaaatttcaagtttaaaaacgctatggagtatttatatgattattctgagactaaa
gaaagccaagaagaacgtgctttgataatagaagatataagaacttggcaaaaacattgg
aattactatcttcgttcgcaacctggcggatatcacacgcttacatcttttttaggacaa
gttgcactggggacaacgcagcagccacggcaagaaggattagccttgctgacggttcat
tcagctaagggcctagaattcgatgtggttgtggtgatgggtatggccgaggggacattt
cctgattatcgtgctagagatggtccagcgctggaagaggagatgagagacgcttttgta
gcagttacacgttcaaagcgcttgcttgcattttcctatcctaggactaaattaatgcct
tggggcagcgaacggaaacaaaggccctcaagatatttgtcaataattggccttatcaaa
cctgataatccaagagggccaaacccagggaaaattgtatga
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