Methanothrix harundinacea: Mhar_0327
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Entry
Mhar_0327 CDS
T01990
Name
(GenBank) Transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
mhi
Methanothrix harundinacea
Pathway
mhi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mhi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Mhar_0327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhi03021
]
Mhar_0327
Transcription machinery [BR:
mhi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
Mhar_0327
Prokaryotic type
Archaeal type
TFE
Mhar_0327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_Ribbon_TF
RepL
FUR
HTH_IclR
HTH_9
Sigma70_r4_2
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
AET63714
UniProt:
G7WM49
LinkDB
All DBs
Position
346660..347157
Genome browser
AA seq
165 aa
AA seq
DB search
MVLIEDPIYRAYLRKLVGEEGLQIVDCMPAEEVTDEYVAEITGISLNTVRRTLYLLYEHR
LAKYRRERDPESGWLTYLWTLCSDNLDRALESEARKLLRKLEERLAYEKENIFYACVGGC
ARFVFDEASENNFICPFCGAGLEYMENDRIVTTLEKRMGELSAVL
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
ttggttctgattgaggatcccatatatcgcgcatacttgcgaaagctcgtgggggaggag
gggctccagatcgtcgactgcatgccggcggaggaggtcaccgatgaatatgtggcggag
atcacggggatcagcctgaatacagtccgcaggaccctctacctcctctacgagcaccgc
ctggcgaagtacaggcgggagagggatcccgaaagcggctggctcacctacctatggact
ttatgctccgataacctcgatcgagccctggagtcggaggcgagaaagcttttgaggaag
ctcgaggagcggctcgcctatgagaaggagaacatattttacgcatgcgttggcgggtgc
gcccgtttcgtcttcgacgaggcgagcgagaacaacttcatctgccccttctgcggcgcg
gggctcgagtacatggagaacgatcggatcgtgacgaccctggagaagaggatgggggag
ctctccgccgtcctgtga
DBGET
integrated database retrieval system
