KEGG   Methanothrix harundinacea: Mhar_0394
Entry
Mhar_0394         CDS       T01990                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
mhi  Methanothrix harundinacea
Pathway
mhi03030  DNA replication
mhi03410  Base excision repair
mhi03420  Nucleotide excision repair
mhi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mhi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Mhar_0394
   03410 Base excision repair
    Mhar_0394
   03420 Nucleotide excision repair
    Mhar_0394
   03430 Mismatch repair
    Mhar_0394
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mhi03032]
    Mhar_0394
   03400 DNA repair and recombination proteins [BR:mhi03400]
    Mhar_0394
DNA replication proteins [BR:mhi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Mhar_0394
DNA repair and recombination proteins [BR:mhi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Mhar_0394
   MMR (mismatch excision repair)
    Other MMR factors
     Mhar_0394
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    Mhar_0394
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad9
Other DBs
NCBI-ProteinID: AET63780
UniProt: G7WMB5
LinkDB
Position
complement(411486..412229)
AA seq 247 aa
MFKAVISAETLRDAVEAVSSLVDEVKFTLSENGVELKAVDPANVAMVSFRLNSEAFEYFK
ATPGEIGVDLVRLADVLSMADRGENVTLELDEENHKLKIGVNSLSYTLSLIDPSAIRKEP
RVPELDLPAHVILPGAHLRKAVRAAEKVSDHVVLGVTDDPEDQFYMEAKGDIDSLKLKMP
GAELLGLKPGKARSLFSLDYLADMSKAIGKAQEVKLEMGVDYPLRISFKLGQGVEINYLL
APRIEQE
NT seq 744 nt   +upstreamnt  +downstreamnt
atgttcaaggcagtgataagcgcagaaaccctgcgggatgctgtggaggcggtttcgtct
cttgtcgacgaggtgaagttcaccctgtcagagaacggcgttgagctgaaggctgtggac
cccgccaacgtggccatggtctccttccggctcaactccgaggccttcgagtacttcaag
gcgacccccggcgagatcggcgtcgacctggtgaggctcgccgacgtcctctccatggcc
gaccggggcgagaacgtcaccctcgagctggacgaggagaaccacaagctaaagataggg
gtgaactccctctcgtacaccttgagcctcatcgacccgagcgccataagaaaagagccc
cgggtgccggagctggacctcccagcccacgtcatccttcccggagcccacctccggaag
gcggtcagggccgccgagaaggtctccgaccacgtagttttgggcgtcaccgacgacccc
gaggaccagttctacatggaggcgaagggggatatcgactccctcaagctgaagatgccg
ggggcggagctcttggggctgaagccaggaaaagcgaggtctctcttctctttggactac
ctcgccgacatgagcaaggctatcggcaaggcccaggaggtgaagctggagatgggggtc
gactaccccctgaggatcagcttcaagctcggccagggcgtcgagatcaactacctcctc
gcaccgagaatagagcaggaatga

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