Methanothrix harundinacea: Mhar_0442
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Entry
Mhar_0442 CDS
T01990
Name
(GenBank) OB-fold nucleic acid binding domain protein
KO
K07466
replication factor A1
Organism
mhi
Methanothrix harundinacea
Pathway
mhi03030
DNA replication
mhi03420
Nucleotide excision repair
mhi03430
Mismatch repair
mhi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mhar_0442
03420 Nucleotide excision repair
Mhar_0442
03430 Mismatch repair
Mhar_0442
03440 Homologous recombination
Mhar_0442
03460 Fanconi anemia pathway
Mhar_0442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mhi03000
]
Mhar_0442
03032 DNA replication proteins [BR:
mhi03032
]
Mhar_0442
03400 DNA repair and recombination proteins [BR:
mhi03400
]
Mhar_0442
Transcription factors [BR:
mhi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
Mhar_0442
DNA replication proteins [BR:
mhi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
Mhar_0442
DNA repair and recombination proteins [BR:
mhi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
Mhar_0442
MMR (mismatch excision repair)
Mhar_0442
DSBR (double strand breaks repair)
HR (homologous recombination)
Mhar_0442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
AET63827
UniProt:
G7WMP3
LinkDB
All DBs
Position
complement(456345..457460)
Genome browser
AA seq
371 aa
AA seq
DB search
MDQEIGEVYEQIKDMISPEEFEERVGEKVELMGELCDRRTAAMLVAREFGEVELKIDRIR
PETGKVTFVGKVVAISEVHEFPRSGGGVGRVANVTLADETGSVRIVLWDELAEPVSTGEL
HLDQTLRVRGFTREGYFGTEVTVDRGGLEEVEAEITTRTEPLKISEVRADMGDIHILARV
LDPGTVREFSRRDGSVGLVRSVILGDSSGKIRLTLWNEKAEIDLAEGDALEVTNALSRER
YGSVEVQAGGYSVVKKSDVPVEYQEKMTQVSDLAAGSICSISGFVSGLGEVREFERDDGT
VGRVANIYVSDGTGRVRVALWNDQVRLIEDLDLGSRIDIVDCMARAGWNGDVELSCGWST
RVTFAPPEERG
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggagatcggggaggtctacgagcagatcaaggatatgatctcccccgaggag
ttcgaggagagggtcggagagaaggtcgagctgatgggggagctctgcgaccggaggacg
gcagcgatgctcgtagcccgggagttcggcgaggtggagctgaagatcgaccggatcagg
cccgagacggggaaggtcaccttcgtcggaaaggtcgtcgccatctctgaggtccacgag
ttcccccggagcggcgggggcgtggggagggtcgccaacgtcaccctcgccgacgagacc
gggagcgtcaggatcgtcctctgggacgagctggcggagcccgtatccaccggggagctc
cacctcgaccagaccctgcgggtccggggcttcacccgggaggggtacttcgggaccgag
gtgacggtggaccggggcggcctcgaggaggtggaggcggagatcaccacccggacggag
cccctcaagatctccgaggtgagggcggatatgggggacatccacatcctcgccagggtc
ctcgacccggggacggtccgggagttctcccggcgggacggctccgtgggcctcgtcagg
tccgtcatcctcggcgacagctccgggaagataaggctcaccctctggaacgagaaggcg
gagatcgacctcgccgagggcgacgccctggaggtgacgaacgccctctcccgagagagg
tacggatcggtggaggtccaggccggagggtactcggtcgtgaaaaagagcgatgttccc
gtcgagtaccaggagaagatgacccaggtctcggacctcgccgccggatcgatctgcagc
atctccggcttcgtatccggcctcggggaggtccgggagttcgagcgggacgacgggacc
gtcggaagggtggcgaacatctacgtctccgacggaacgggccgggtgagggtcgccctc
tggaacgaccaggtccggctgatcgaggacctcgacctcggctccaggatagatatcgtc
gactgcatggctcgggcggggtggaacggcgatgtggagctgagctgtgggtggagcacc
agggttactttcgccccgcccgaggagaggggttaa
DBGET
integrated database retrieval system
