Methanothrix harundinacea: Mhar_0494
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Entry
Mhar_0494 CDS
T01990
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mhi
Methanothrix harundinacea
Brite
KEGG Orthology (KO) [BR:
mhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhi03032
]
Mhar_0494
03400 DNA repair and recombination proteins [BR:
mhi03400
]
Mhar_0494
Enzymes [BR:
mhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Mhar_0494
DNA replication proteins [BR:
mhi03032
]
Prokaryotic type
DNA Topoisomerases
Mhar_0494
DNA repair and recombination proteins [BR:
mhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Mhar_0494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
RAD51D_N
DUF4332
IMS_HHH
HHH
Cdd1
IMS_HHH_1
Homeobox_KN
Motif
Other DBs
NCBI-ProteinID:
AET63876
UniProt:
G7WN20
LinkDB
All DBs
Position
complement(495094..497310)
Genome browser
AA seq
738 aa
AA seq
DB search
MHLIIAEKHNVAKRIAQILAGSKPKVKRVHGIEAFYFDDKVVMGLSGHIVGVDYPPGYNN
WQKVDYRDLIHAEVVTRPTQGKIVSALHDLGKDADRITIATDYDREGELIGVEALRIAED
ANPTIKADRVRFSAITKGEIQDAFESPGEVDFDLASSGEARQVVDLIWGAALTRFISITS
GRLGKGFLSVGRVQSPTLALIVDREKEIEAFKPQPYWEISACLEKDLRVKHEKGRIWEGD
LARSIFEELGEVATVVSIKEKTRTDRPPAPFDTTAFISAASGIGFSAANAMRIAEWLYTS
GFISYPRTENTVYPKTLDLRALVSIFKKGPFREDAERVLSGPMVPTRGKRFSTDHPPIYP
TAPAAKADMKPDQWKIYELVVRRFLATLSGPSRWIVMNVRVEIDGQPFRATGARQIEAGW
RACYPYSKAAEEILPQLSEGEKLRVLGKELEEKETQPPSRYGQGRLVKLMDELGLGTKST
RHEIISKLYARAYVQGNPMKPTNTAYAVVEALQQHSPNITKPDMTRTLEEDMTKIANGHV
GEEAVIEESRSMLDAVFDDLLRHQEEIGTTLREGLRTDKIVGLCQICGHELIIRRGRRGS
RFIGCAGYPDCTFTLPLPKFGMIVVTDKACEEHGMQQIRIINKGKRPWDLGCPKCNFDQW
QAKKAEEAKKKTEVDLLAKIPGIGPKTLEKLGAAGVKTALDLAGAEAEALAEKTGLTKKK
ISSWQLLAKTMVNEAQSC
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcatcatcgccgaaaagcacaatgtcgccaagaggatcgcccaaattctcgcc
gggtccaagccgaaggtcaaacgggttcacgggatcgaagcattttacttcgacgataag
gtcgtcatgggcctctccggccacatagtcggggtcgactacccgcccggctacaacaac
tggcagaaggtggactaccgagacctgatccacgccgaggtggtgaccaggccgacccag
ggcaagattgtatccgccctccacgacctgggaaaggatgcagaccggatcaccatcgcc
accgactacgaccgggagggggagctgatcggggtcgaggccttgaggatagccgaggat
gcgaacccaacgatcaaagcagacagggtgaggttcagcgccatcaccaagggggagatc
caggacgccttcgaatcccccggggaggtggacttcgacctcgcatcctccggggaggcg
aggcaggtcgtcgacctgatctggggcgccgccctcacccggttcatctccatcacctcc
gggaggctggggaagggcttcctctcggtggggagggtccagtcccctaccctggccctc
atcgtcgaccgggagaaggagatcgaggccttcaagccccagccctactgggagatcagc
gcctgcctcgagaaggacctccgggtgaagcatgagaaggggaggatctgggaaggagac
ctggcgaggtcgatcttcgaggagctcggggaggtcgccaccgtagtctccatcaaggag
aagacgcggaccgacaggccccccgcccccttcgataccaccgccttcatcagcgccgcg
agcggcatcggcttctctgccgccaacgccatgaggatcgccgagtggctctacaccagc
gggttcatcagctatcccaggaccgagaacaccgtctacccgaagaccctggacctcagg
gccctggtatcgatcttcaagaagggtcccttccgggaggacgcggagcgggtcctgtcg
gggccgatggtaccgaccaggggcaagaggttctcgacggaccacccccccatctacccg
acggctccggccgccaaggcggatatgaagcccgaccagtggaagatctacgagctcgtc
gtcagaagatttctggcgaccctctccggcccctcccgctggatcgtcatgaacgtccgg
gtggagatcgacggccagcccttcagggcgacgggtgcccggcagatcgaggccgggtgg
cgggcgtgctacccctacagcaaggccgccgaggagatcctcccccagctctccgagggg
gagaagctccgggtcctggggaaagagctggaggagaaggagacccagccgccctcgagg
tacggccaggggaggctcgtcaagctgatggacgagctggggctggggacgaagtcgacg
aggcacgagatcataagcaagctctacgcccgggcctacgtccagggaaaccccatgaag
ccgacgaacacagcctacgccgtcgtcgaggccctgcagcagcattcgcccaacatcacc
aagccggatatgacccggaccctggaggaggacatgacgaagatcgccaacggccacgtc
ggagaggaggcggtgatcgaggagtcgaggtcgatgctcgacgccgtcttcgacgacctc
ctccgccaccaggaggagatagggacgaccctccgcgaggggctccggaccgacaagatc
gtgggcctctgtcaaatctgcggccacgagctgatcatccggaggggaaggcgcggcagc
aggttcatagggtgtgccggctaccccgactgcaccttcaccctccccctgccgaagttc
gggatgatcgtcgtcaccgacaaggcctgcgaggagcacgggatgcagcagataaggatc
atcaacaaggggaaacgcccctgggacctcggctgccccaagtgcaacttcgaccagtgg
caggcgaagaaggccgaggaggcgaagaagaagacggaggtcgacctcctcgccaagatc
cccgggatcggccccaagaccctggagaagctcggggcagccggggtgaagaccgccctc
gacctggccggggccgaggcggaggcgctggcggagaagaccggccttactaaaaagaag
atatcctcgtggcagctcctcgccaagacgatggtaaacgaggcacaaagctgctga
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