Methanothrix harundinacea: Mhar_0908
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Entry
Mhar_0908 CDS
T01990
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mhi
Methanothrix harundinacea
Pathway
mhi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mhi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Mhar_0908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhi03019
]
Mhar_0908
03009 Ribosome biogenesis [BR:
mhi03009
]
Mhar_0908
04131 Membrane trafficking [BR:
mhi04131
]
Mhar_0908
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mhi04147
]
Mhar_0908
Messenger RNA biogenesis [BR:
mhi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Mhar_0908
Ribosome biogenesis [BR:
mhi03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Mhar_0908
Membrane trafficking [BR:
mhi04131
]
SNARE
SNARE associated proteins
Others
Mhar_0908
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Mhar_0908
Exosome [BR:
mhi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Mhar_0908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
TIP49
CDC48_2
AAA_22
AAA_2
AAA_14
AAA_33
AAA_lid_PRS2_C
AAA_28
RNA_helicase
nSTAND3
NPHP3_N
Mg_chelatase
NACHT
IstB_IS21
ABC_tran
Sigma54_activat
AAA_7
AAA_24
AAA_18
Parvo_NS1
NB-ARC
DUF815
TsaE
ATPase
SLFN-g3_helicase
AAA_25
AAA_11
AAA_3
AAA_30
Zeta_toxin
PhoH
AAA_17
ATP-synt_ab
ResIII
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
AET64279
UniProt:
G7WLH6
LinkDB
All DBs
Position
complement(992909..995191)
Genome browser
AA seq
760 aa
AA seq
DB search
MTDSESIRLKIIEADQRDVGKGIVRISGRQMADLGVADYDLVEIRGTKATSALAVKAYPT
DEDMDVARVDGLIRSNVGAGIGQYVEISKAEWRPAERVSLAPVGRGIQISIPSEALRKVF
LGRPVSKGDVISTTTLRRPPGDLATGKDTMFDEIFKRSDKGSAFGLGEVKMRVVSTVPSG
TVRIGEETELELLSRAVDAKAAAEVVYEDLGGMKHAIQRVREMIELPLKHPELFERLGID
PPRGVLLHGPPGTGKTMLAKAVANESSAHFASINGPEIVSKYYGESEKRIREVFEESERN
APAIIFLDELDSIAPKREEVAGEMERRMVAQLLSLMDGQKERANVIVIGATNRPDAVDPA
LRRPGRFDREIELGVPDFEGRREILQIHTRGMPLAQDVDLEEFATLTYGFVGADIAAFSR
EAAMNALRRVLPRIDLDEPTIPREILEELVVTRGDLEAAMHEVSPSALREILIEVPNVTW
ADVGGLEGVKQLLVEAVEWPLVYGENFRRLGIEAPKGVLLYGPPGTGKTLLAKAVANESN
ANFLTTKGSEILSKWYGESERHIAEIFRKARQVAPAIVFLDELDSLAPVRGGGTGEPHVT
ERIVNQLLSEIDGMEELRGVVVIAATNRPDIIDPALIRPGRFDELIMVPVPDAASRRKIF
AVHTGKMPLAEDVDLDRLVERTDQYTGADIASICRKAGRLALREDMNAVEVRKSHFLAAL
EEVGPSVTPDTMKYYAKLSGELRKKGSRAVEKAVEEMEKK
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaccgactccgaatccatccggctgaagatcattgaggctgaccagagggacgtggga
aaggggatcgtgaggataagcgggcggcagatggccgacctgggggtcgccgactacgac
ctggtggagatcagggggacgaaggctacaagcgccctcgcggtgaaggcctaccccacc
gacgaggatatggacgtcgcccgggtggacggcctcatacggtcgaacgtgggggcgggg
atcggccagtacgtcgagatctccaaggccgaatggaggccggccgagagggtctcttta
gcgccggtggggcgcggaatccagatctcgatccccagcgaggccctccggaaggtattc
ttgggacggcccgtctcgaagggggacgtcatctccaccaccaccctccggcggccgccc
ggcgacctcgccaccggaaaggacaccatgttcgacgagatcttcaaaaggtccgataag
ggctccgccttcggcctcggggaggtgaagatgagggtcgtatcgacggtgccatcgggg
acggtcaggatcggcgaggagacggagctggagctcctctcccgggcggtagacgccaag
gccgcggcggaggtggtctacgaggacctgggggggatgaagcacgccatccagcgggtc
cgggagatgatcgagctccccctcaagcaccccgagctcttcgagcggctggggatcgat
cccccgaggggggtcctcctccacggccccccggggacgggaaagacgatgctcgccaag
gccgtcgccaacgagtccagcgcccacttcgcctcgatcaacggccccgagatcgtatcc
aagtactacggcgagagcgagaagaggatccgggaggtcttcgaggagtcggagaggaac
gctccggcgatcatcttcctcgacgagctcgactccatcgcccccaagcgggaggaggtg
gcgggcgagatggagcggaggatggtcgctcagctcctctccctgatggacggccagaag
gagagggcgaacgtcatcgtcatcggggcgacgaacaggcccgacgccgtcgatcccgcc
ctccggaggcccggcaggttcgaccgggagatagagctcggggtccccgacttcgaaggg
cggcgcgagatcctccagatccacacccgggggatgcccctcgcccaggacgtcgacctg
gaggagtttgccaccctcacctacggcttcgtcggggctgacatcgccgccttctcccgg
gaggcggcgatgaacgccctccggcgggtcctgcccagaatcgacctcgatgagcccacc
ataccccgggagatcctggaggagctggtggtgacgaggggggacctggaggcggcgatg
cacgaggtctctccgagcgcgctgcgggagatcctgatcgaggtgccgaacgtcacctgg
gccgacgtcggcggcctcgaaggggtgaagcagctcctcgtcgaggcggtggagtggccc
ctggtctacggcgagaacttcaggaggctcgggatcgaggcgccgaagggggtcctcctc
tacggcccgccggggacgggaaagacccttctagcgaaggccgtggccaacgagtcgaac
gccaacttcctgacgacgaaggggagcgagatcctctcgaagtggtacggcgagagcgag
cggcacatcgccgagatcttcaggaaggcgaggcaggtggcccccgccatcgtcttcctc
gacgagctcgactccctcgcccccgtccggggcggagggaccggcgagccccacgtcacc
gagaggatagtaaaccagctcctctcagagatcgacgggatggaggagctgcggggcgtc
gtcgtgatagccgccaccaaccgccccgacatcatcgaccccgccctgatcaggcccggc
aggttcgacgaattgatcatggtgccggtgccggacgccgcctccaggaggaagatcttc
gccgtccacaccgggaagatgcccctcgccgaggacgtcgacctcgatcggctcgtcgag
aggactgaccagtatacgggagccgacatcgcctccatctgccggaaggcggggaggctc
gccctccgggaggatatgaacgccgtcgaggtgagaaagagccacttcctcgccgccctg
gaggaggtcggcccctccgtcacccccgacaccatgaagtactacgccaagctctcgggg
gagctgcggaagaagggttcccgggccgtcgagaaggcggtggaggagatggagaaaaag
tga
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