Methanothrix harundinacea: Mhar_1241
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Entry
Mhar_1241 CDS
T01990
Name
(GenBank) tRNA-splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mhi
Methanothrix harundinacea
Brite
KEGG Orthology (KO) [BR:
mhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mhi03016
]
Mhar_1241
Enzymes [BR:
mhi01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Mhar_1241
Transfer RNA biogenesis [BR:
mhi03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Mhar_1241
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Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
AET64606
UniProt:
G7WNB5
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All DBs
Position
1339314..1340372
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AA seq
352 aa
AA seq
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MAEDPILGELSGDKVLLGGAATGELYEQGSFGRPVPGGLHLSLVEAAYLLDRGRISVRVG
GEDLDFQSFFEAATALEAGFEFRYVVYKDLRERGYYVQPGVTDFRVYPRGGKPGKTPAEF
YVHVVSEREPVPLKELVEPAKIARQMRKRLMLAVVDEESDITFYEAKDRDLKGEMEVEAP
GGTATLLEDRVMLWDPEASEALHEGGFYGKPVGGRLQLSLVESAYLLEKGVLRIVDRSGA
PLTPEEFSRRSRLVEEEFDMKRLVYRDLRDRRLVVKTGFKFGSHFRVYKRVEGSKKVPHS
EYLVHSVPEGHIFHLPVVSRAVRLAHSVRKQMVFARQEGDEVKYLEIRRLKP
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagaccccatcctgggcgagctgtcgggggataaggtcctcctgggcggagcg
gcgacgggggagctctacgagcaggggagcttcgggaggcccgtccccgggggcctccac
ctctccctggtggaggcagcctaccttctggaccggggtcggatatccgtccgcgtcggc
ggagaggatctcgacttccagtccttctttgaggcggcgacggccctggaggcgggcttt
gagttccggtacgtcgtctacaaggacctccgggagaggggctactacgtccagccgggg
gtcaccgacttccgggtctacccccggggggggaagcccgggaagacccccgccgagttc
tacgtccacgtcgtatcggagagggagcccgtccccctcaaagagctggtggagccggca
aagatcgcaaggcagatgagaaagaggctgatgctggcggtcgtcgacgaggagagcgac
ataaccttctacgaggcgaaggatagggatctgaagggcgagatggaggtcgaggccccg
ggcggcaccgccaccctcctggaggatcgggtgatgctctgggaccccgaggcctccgag
gccctccacgagggggggttctacggcaagcccgtgggcgggaggctccagctctccctg
gtggagtcggcgtacctcctggagaagggggtcctcaggatcgtcgatcggtctggagcc
cccctcacccccgaggagttttcgaggcggtctaggctcgtcgaggaggagttcgatatg
aagaggcttgtctatcgggacctcagggaccggaggctggtggtgaagaccgggttcaag
ttcggaagccacttccgggtctataagagggtggagggttcaaagaaggtcccccactcc
gagtacctcgtccactccgtccccgaggggcacatattccacctccccgtcgtctcccgg
gccgtcaggctcgcccatagcgtccgaaagcagatggtcttcgcccgccaggagggggac
gaggtgaagtacctggagatcaggcggctgaaaccctga
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