Methanothrix harundinacea: Mhar_1436
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Entry
Mhar_1436 CDS
T01990
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mhi
Methanothrix harundinacea
Pathway
mhi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mhi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Mhar_1436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhi03019
]
Mhar_1436
03009 Ribosome biogenesis [BR:
mhi03009
]
Mhar_1436
04131 Membrane trafficking [BR:
mhi04131
]
Mhar_1436
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mhi04147
]
Mhar_1436
Messenger RNA biogenesis [BR:
mhi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Mhar_1436
Ribosome biogenesis [BR:
mhi03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Mhar_1436
Membrane trafficking [BR:
mhi04131
]
SNARE
SNARE associated proteins
Others
Mhar_1436
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Mhar_1436
Exosome [BR:
mhi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Mhar_1436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
CDC48_2
AAA_5
RuvB_N
TIP49
AAA_22
AAA_2
AAA_33
nSTAND3
AAA_14
AAA_28
AAA_18
AAA_7
NPHP3_N
RNA_helicase
Mg_chelatase
SLFN-g3_helicase
ABC_tran
Zeta_toxin
AAA_3
IstB_IS21
AAA_lid_PRS2_C
Sigma54_activat
ATPase
AAA_19
DUF815
Parvo_NS1
TsaE
AAA_25
AAA_17
AAA_24
AAA_11
Cytidylate_kin2
ResIII
NB-ARC
Vps4_C
IPT
Motif
Other DBs
NCBI-ProteinID:
AET64800
UniProt:
G7WKH3
LinkDB
All DBs
Position
1542693..1544903
Genome browser
AA seq
736 aa
AA seq
DB search
MKEIQLKVAKAYPNDSARGIARLDPNALLTLRLSPGDIIEIEGRRTSAAKVWRADRQDWS
QDYIRIDGFIRHNVGVSIGDRVKIRRAKEAEALRVVISPPAGAHTYYGEDAAEQIKRQTL
KRPIVRGDVLPIMSSSGHPFIGRMEAVPLVIADTDPEGVVVITERTEVSLLDRPVKGFGS
VKGTGIAYEDVGGLRKEVQRIREMIELPMKHPEVFNRLGIEPPKGVLLHGSPGTGKTLIA
KALANETNANFFSIAGPEVMSKYYGESEQRLREIFEEANRSTPSIIFIDELDSIAPKRGE
VTGEVERRVVAQLLAMMDGLKERGQVVVIGATNRIDAIDPALRRPGRFDREIEIGVPDRV
DRLEILQIHVRNMPIDGSVSLEDLADRTNGFVGADISALCKEAAMKVLRRHLPEISFDDD
IPEEVLEEMSVTADDFDDALKEIEPSAMREVFVEISDVTWRDVGGMGPVRQEIVESVEWP
LRRPAKFEEMGIRPPRGVLLYGPPGTGKTLIARAVARETKANFISVKGPQLLSKWVGESE
KAVREVFKKARQVSPAIIFFDELDAIAPMRGMEEGPRTSERVVNQLLAELDGLETLKDVV
VIGATNRPDIIDPALLRSGRFDRLLFVGPPDRAGRLEILRIHTKKTPNGDDVSLEELAEL
TESFVGSDLESLCREAVMLALREDPEASEVEMRHYREALKRVRPSFEENMGRYYERINER
FRGGVKVDPSSYLGYR
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagagattcagctcaaggtggccaaggcttaccccaacgactcggcccgggggatc
gctcgcctcgaccccaacgccctcctgacgttgcggctctcgccgggagatatcatcgag
atcgaggggaggaggacctccgccgccaaggtctggcgggccgaccggcaggactggagc
caggactacatcaggatcgacggcttcatccggcacaacgtcggggtgagcataggggac
cgggtgaagatccggagggcgaaggaggctgaagctctccgggtcgtcatctccccgccg
gccggggcccacacctactacggcgaggatgccgccgagcagataaagaggcagactctg
aagcggcccatcgtccggggggacgtcctccccatcatgagctcctcgggccaccccttc
atcggtaggatggaggcggtgcccctggtgatcgcagacaccgatccggagggggtggtg
gtgatcaccgagaggacggaggtctccctcctcgaccggcccgtcaagggcttcggctcg
gtgaaggggaccggcatcgcctacgaggacgtcggcggcctcagaaaggaggtccagcgg
ataagggagatgatcgagcttccgatgaagcaccccgaggtcttcaaccggctcggcata
gagccccccaagggcgtcctcctccacggctctccggggacgggaaagaccctgatcgcg
aaggccctcgccaacgagacgaacgccaacttcttctccatcgccggccccgaggtgatg
tccaagtactacggcgagtccgagcagaggctccgggagatcttcgaggaggcgaaccgg
tccaccccctccatcatattcatcgacgagctcgactccatcgccccgaagcggggcgag
gttaccggcgaggtggagaggagggtcgtcgcccagctcctggcgatgatggacggcctc
aaggagagggggcaggtggtggtgatcggggcgacgaaccggatcgacgccatcgacccg
gcccttcgcaggcctgggaggttcgatcgggagatcgagatcggcgtcccggaccgggtc
gacaggctggagatcctccagatccacgtccgaaacatgcccatcgacggttcggtgagc
ctcgaggacctcgccgacaggacgaacggattcgtcggcgccgacatctccgccctctgc
aaggaggcggcgatgaaggtcctcagaaggcaccttcccgagatatccttcgacgacgac
atccccgaggaggtgctggaggagatgtcggtgaccgcggatgacttcgacgacgccctc
aaggagatcgagccctccgccatgagggaggtcttcgtcgagatctccgacgtcacctgg
agggacgtgggcgggatggggccggtccgccaggagatcgtcgagtcggtggagtggccc
ctgaggcggccggcgaagttcgaggagatggggatccggcccccccggggcgtcctcctc
tacggcccgccggggacgggaaagaccctcatcgctagggccgtcgcccgggagacgaag
gcgaacttcatatcggtgaagggcccccagctcttatcgaagtgggtcggcgagtcggag
aaggcggtgagggaggtcttcaagaaggcccggcaggtctcccccgccatcatcttcttc
gacgagctcgacgccatcgcccccatgagggggatggaggaggggcccaggacgagcgag
cgggtggtgaaccagctcctggcggagctcgacggcctggagaccctcaaggacgtggtg
gtaataggcgccaccaacaggccggacatcatcgaccccgccctcttgcggtccgggagg
ttcgaccgcctcctcttcgtcggcccccccgatcgggccgggaggctcgagatcctccgg
atccatacaaaaaagacgccgaacggggacgacgtcagcctggaggagctggcggagctg
actgagagcttcgtcggctccgaccttgagtccctctgccgggaggcggtgatgctcgcc
ctccgggaggacccggaggcttctgaggtggagatgagacactaccgggaggcgcttaag
agggtcaggcccagcttcgaggagaatatggggcggtactacgagcggatcaacgagcgg
ttcaggggcggcgtcaaggtcgaccccagctcctatctggggtaccggtga
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