Methanothrix harundinacea: Mhar_1577
Help
Entry
Mhar_1577 CDS
T01990
Name
(GenBank) Putative ATP-dependent RNA helicase
Organism
mhi
Methanothrix harundinacea
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Helicase_C
DEAD
RNA_helicase_helical
ResIII
HHH_2
HHH_5
HHH
Cas3-like_C_2
5_3_exonuc
HHH_3
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AET64937
UniProt:
G7WP96
LinkDB
All DBs
Position
1693662..1696028
Genome browser
AA seq
788 aa
AA seq
DB search
MTSYIQHPLLKEKAVERRLFQLELAASALQASTLVVLPTGLGKTVVALMVLIARLNRGKV
LFLAPTKPLVEQHASFLENVLADSTIVASFTGEILPERRKEMWEEAKIVVSTPQVIENDL
LSRRISLRDVSCIIFDEAHRAVGNYAYVYIAERYGREGTDRLVLGITASPGSSLERIEEV
CGNIGATRIETKTEADPDVSPFVHQREIEVVKVAVPPEIQRVRSLLEEVLEERGEALDRL
GGSDGLRMPKRMDRTSKKELLDLQKRLRGLIAKNPSPSLYQAVSVLAEVLKLKHAVELAE
TQGVDSLGRYLERLASEAESRGGSKAAKRIMEDPRVEEAVGDLARMDVDHPKLRAVLELV
KEQLTAKADSRIMVFTNYRDTASSVLDYLREAGDEIIRPVRFVGQSSRASDEGLSQRRQA
EILQKFREGAYNVLIATSVGEEGIDIPATDLVLFYEPVPSEIRSIQRKGRTGRARAGRVV
VLVARGTRDEAYRWISDRKEKSMRQQIREMSWPDRRDLGSAAGAGGGEGHGLSSGPRVGR
QLVIGEVGPGPGGEPGGPGESRPLGPPDLFGLSEEASALVIVDPRERSLARMLESMGVGV
TLRVLEVGDYVVSDRVGIERKTADDFVDSLVGAERNIFAQLKDLARSYERPILILEGRDL
YARQVHPNAIRGALASIAVDFGVAIIPTADEDETVSVIAAIARREQHAGGGAPHAHGKKT
HRTLKEQQEYLVSSIPGVGNAVAKNLLRHFGSVERVFAASAEELKEVELVGPKTAERIRE
LVGGEYKG
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgacctcctacatccagcatcctctgctgaaggagaaggcggtggagaggcggctcttc
cagctggagcttgcggcctccgccctccaggcctcgaccctggtggtcctgccgacgggt
ctgggaaagaccgtcgtcgccttgatggtcctcatcgccaggctaaaccggggcaaagtc
ctcttcctcgccccgacgaagcccctggtggagcagcacgcctcatttcttgagaacgtc
ctcgccgacagcaccatcgtcgcctccttcactggcgagattttgccggagaggcgaaag
gagatgtgggaggaggctaagatcgtcgtatcgaccccccaggtgatcgaaaacgaccta
ttatcccggaggatatccctccgggacgtctcctgcatcatcttcgacgaggcccaccgg
gccgtcggaaactacgcctacgtctatatagcggagcggtacggtcgagagggaaccgat
cggctcgtcctcgggatcacggcgagccccgggagcagcctcgagcggatcgaggaggtc
tgcggaaacatcggcgcgacgaggattgagaccaagaccgaggcggaccccgacgtctcc
cccttcgtccaccagcgggagatcgaggtcgtcaaggtggcggtccccccggagatccag
agggtccggtccctcctggaggaggtcctggaggagcggggcgaggccctcgaccgcctc
ggcgggtccgatggcctccggatgccgaagaggatggaccggacctcgaagaaggagctt
ctagacctgcagaagaggctccggggccttattgcaaagaacccgtcgcctagcctctac
caggcggtctcggtcctggcggaggtcctgaagctgaagcacgccgtcgagctcgccgag
acgcaaggggtcgactccctcggccggtacctggagaggctcgcctcggaggcggagtcg
aggggggggagcaaggccgcgaagaggatcatggaggacccgagggtggaggaggcggtc
ggggacctcgccaggatggacgtcgaccatccgaagctccgggccgttctggagctggtg
aaggagcagctcaccgccaaggccgactcgaggatcatggtcttcaccaactaccgggac
accgccagctccgtcctcgactacctgagggaggcgggagatgagatcataaggcccgtg
cggttcgtcggccagtcgagccgggcctccgacgaggggctgagccagaggaggcaggcg
gagatcctccagaagttccgggagggcgcctacaacgtcctgatcgccacctccgtcggg
gaggaggggatcgacatcccggcgacggacctggtcctcttctacgagccggtccccagc
gagatcaggtcgatccagaggaagggtaggaccggtcgggcgagggccggccgggtcgtg
gtcctcgtagcccgggggacgagggacgaggcgtaccgctggatcagcgacaggaaggag
aagagcatgcgccagcagatccgggagatgagctggccggaccggcgggacctgggatcg
gcggccggggccgggggaggagagggccatggcctctcctccggcccccgggtcggaagg
cagctcgtcatcggcgaggtggggccagggccggggggggagcccggagggcccggcgag
tccaggcccttgggcccccccgacctcttcggcctctccgaggaggcctccgccctcgtc
atcgtcgacccgagggagaggagcctcgcccggatgctggagtcgatgggggtgggggtg
accctgcgggtcctggaggtgggagactacgtcgtcagcgaccgggtcgggatcgagagg
aagaccgcggacgacttcgtcgactccctcgtcggcgcggagaggaacatcttcgcccag
ctgaaggacctcgcccggtcctacgagaggcctatcctgatcctggaggggcgagacctc
tacgctcggcaggtccacccgaacgccatccggggcgctctcgcctccatagccgtcgac
ttcggcgtcgccatcatcccgacggcggacgaggatgagaccgtctcggtgatcgccgcc
atcgcccggcgggagcagcacgccgggggcggcgccccccacgcccacggcaagaagacc
caccggactctgaaggagcagcaggagtacctggtctcctcgatcccaggggtcggaaat
gcagtggcaaagaacctcctccgccacttcgggtccgtggagcgggtcttcgccgcctcg
gcggaggagctgaaggaggtggagctggtggggccgaagaccgcagaaaggatccgggag
ctggtgggcggggagtacaaggggtga
DBGET
integrated database retrieval system
