Methanothrix harundinacea: Mhar_1587
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Entry
Mhar_1587 CDS
T01990
Name
(GenBank) Peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
mhi
Methanothrix harundinacea
Pathway
mhi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mhi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Mhar_1587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhi03019
]
Mhar_1587
03012 Translation factors [BR:
mhi03012
]
Mhar_1587
Messenger RNA biogenesis [BR:
mhi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Mhar_1587
Translation factors [BR:
mhi03012
]
Eukaryotic type
Release factors
Mhar_1587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
SpdB
Motif
Other DBs
NCBI-ProteinID:
AET64947
UniProt:
G7WPA6
LinkDB
All DBs
Position
complement(1704528..1705769)
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AA seq
413 aa
AA seq
DB search
MEFTAQEKYEFKRLLEDLRSKSGRGTELISLYIPPDKQISDVTAQLRDEHGQASNIKSKL
TRTNVQSALESVMARLRLIPKAPPNGVAIFVGAVDIGGNKTDMYSRVLEPPEPIVTYRYH
CDSSFLLTPLEDMLADKKTFGLIVLDRREATIGTLRGKQVEAIKHLTSSVPGKQRKGGQS
SHRFQQLRLIAIHEFYKRIGDSATEAFLSIDRKDLEGILIGGPSPTKEEFVDGAFLHHEL
QQRILEALDVTYTDESGLYELVEAAQERLLDLELTQEKLVMRRFMKELVSDKGLASYGEK
EVRENLTMGAVDTLLLSEDLRKTRARIVCTNASCDFSEDATRSSNSPPPGTCLRCGSQLA
LADEVDIISDLSRMAEESGSSVKIISTDFEEGAQLLRAFGGIAAILRFRTSSR
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggagtttaccgcccaagagaagtacgaattcaaacggctgctcgaagacctgaggagc
aagagcggtaggggaacagagctgatctcgctctacatcccccccgacaagcagatatcg
gacgtcacagcccagctccgggacgagcacggccaggcgtccaacatcaagtccaagctc
acccggacgaacgtccagagcgccctcgagtcggtgatggcaaggctccggctgatccca
aaggcccctcccaacggcgtcgccatcttcgtcggggccgtcgacatcggcggaaacaag
accgacatgtacagccgggtcctggagcctccggagccgatcgtcacctaccggtaccac
tgcgactcatcgttcctcctaacccccctggaggatatgctcgccgacaagaagaccttc
ggcctcatcgtcctcgaccggagggaggcgacgatcgggaccctccggggaaagcaggtg
gaggccataaagcacctcacctcctcggtccccggaaagcagaggaagggcgggcagagc
agccacaggttccagcagctgaggctgatcgcgatccacgaattctacaagaggatcgga
gacagcgccaccgaggcgttcctctccatcgacagaaaagacctggaggggatcctgatc
ggagggccgtccccgacgaaggaggagttcgtcgacggcgccttcctccaccacgagctc
cagcagaggatcctggaggccctggacgtcacctacaccgacgagtcggggctctacgag
ctggtggaggcggcccaggagcggctcctcgacctggagctgacccaggagaagctggtc
atgaggaggttcatgaaggagctggtgagcgataagggcctcgcctcctacggggagaag
gaggtccgggagaacctgacgatgggggcggtggacaccctcctcctctccgaggacctc
cggaagacgagggcccggatcgtctgcaccaacgccagctgcgacttctccgaagatgcc
acgcgatcgtcgaacagcccgcctccggggacctgtctgaggtgcgggtctcagctcgcc
ctagccgacgaggtggacatcatatccgacctctcccgaatggcggaggagagcggaagc
tccgtcaagatcatatccaccgacttcgaggagggggcccagctcctccgggccttcggc
ggcatcgcggcgatcctgcggttcaggacgagcagccgctga
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