Methanothrix harundinacea: Mhar_1808
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Entry
Mhar_1808 CDS
T01990
Name
(GenBank) Deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
mhi
Methanothrix harundinacea
Brite
KEGG Orthology (KO) [BR:
mhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhi03400
]
Mhar_1808
Enzymes [BR:
mhi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
Mhar_1808
DNA repair and recombination proteins [BR:
mhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
Mhar_1808
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AET65166
UniProt:
G7WPG5
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All DBs
Position
1950035..1951651
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AA seq
538 aa
AA seq
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MEYIQFSATDKSWNHHIHRRGESAAWRSDPRGKTMSHKKAAVIFPHHLYRDHPSLRDPEL
STVFLVEEARFFTDFNFNKKKLVLHRASMRGYQELLLERGLEVEYLEKRRKEALPALFSA
LHESGIGIVRTAEIIDHPLEASFFKGLEAKGIRIEVDDSPGFLTTRALAHDLLRGRERIS
MASFYRRQRLRLKVLVEDGRPLGGRWSFDPENRRRIPKEAEIPPPPALEESGIVREAKEY
VEERFPDNPGSVDGFNFPTTFKEAELWLQDFLARRLASFGDYEDAMRRDDPFLFHSLLSS
SLNIGLLTPREVLDRTLAHASKVEVPINSLEGFIRQLIGWREFMRAAYLIEGDRERRSNF
WGHHEKIPPALYSGTTGISPVDQVVGRAIDHAYAHHIERLMVLGSFMNLCEIDPAEVYRW
FMEIFIDSFDWAMVPNVYGMSTYADGGLITTKPYISGSSYLRRMGDWPKGEWAEIWDGLF
WRFVHLHRDVFAENPRTRVLAHQLDRIGEEMLERHLEVAEEFLRSFRVRGSIVGVGPG
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggaatatatccaattttcagcaactgataaatcctggaaccatcatatccaccgacga
ggggagtcggcagcttggaggtcggacccccgggggaagactatgagccataagaaagcc
gctgtcatatttcctcaccacctctatagagatcatccgtccctccgggacccggagctc
tcgacggtcttcctggtggaggaggctcggttcttcaccgatttcaacttcaataagaag
aagctcgtcctccacagagcctccatgaggggctaccaggagctgcttttggagaggggg
cttgaggtggagtacctggagaagaggcggaaggaggcccttccggccctcttttcagcc
ctccacgagagcggtatcgggatcgtgcggacggccgagatcatcgaccacccccttgaa
gcatccttcttcaaggggctggaggcgaaggggatcaggatcgaggtagacgactccccg
ggatttctgaccaccagggccctcgcccacgacctcctccgggggagggagcggatctcc
atggcctccttctatcggcggcagaggctgaggctgaaggtcctggtggaggatggaagg
cccctgggcggaaggtggagcttcgaccccgagaaccggaggcgcatcccgaaggaggcc
gaaataccgccgccgccagccctggaagagagcggcatcgtcagggaggcgaaggagtac
gtagaagagcggttccccgataaccccggctccgtcgatgggttcaacttccccaccacc
ttcaaagaggcggagctctggctccaggacttcctcgctaggaggctcgcctccttcggc
gactacgaggacgccatgagacgagacgatcccttcctcttccactccctcctctcctcc
tccctcaacataggcctcctcacccctcgggaggttctggataggaccctcgcccatgca
tcaaaggtcgaagtccccatcaactccctggaggggttcatccggcagcttatcggctgg
cgcgagttcatgagggcggcctacctgatcgagggggatagggagaggagatctaacttc
tggggccaccacgagaagatcccgccggcgttgtacagcgggacgacggggatttcccct
gtggaccaggtcgtcggccgggcgatcgatcacgcctacgcccatcacatcgagaggctg
atggtcctcggaagcttcatgaacctctgcgagatcgaccccgccgaggtttacaggtgg
tttatggagatcttcatcgactcctttgactgggcgatggtccccaacgtctacgggatg
tccacctacgccgacggagggctcatcaccaccaagccctacatcagcggctccagctac
ctccggaggatgggggactggccaaagggcgagtgggccgagatctgggacggcctcttc
tggcggttcgtccacctccaccgggacgtcttcgccgagaaccccaggactagggtccta
gcccaccagctcgatcggatcggcgaagagatgctggagaggcacctggaggtggccgag
gagttcctccgctctttcagggtgaggggatctatcgtaggagtcgggccgggatga
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