Methanothrix harundinacea: Mhar_1926
Help
Entry
Mhar_1926 CDS
T01990
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mhi
Methanothrix harundinacea
Brite
KEGG Orthology (KO) [BR:
mhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mhi03016
]
Mhar_1926
Enzymes [BR:
mhi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Mhar_1926
Transfer RNA biogenesis [BR:
mhi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Mhar_1926
Prokaryotic type
Mhar_1926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DUF5559
Motif
Other DBs
NCBI-ProteinID:
AET65282
UniProt:
G7WQ90
LinkDB
All DBs
Position
2078433..2079710
Genome browser
AA seq
425 aa
AA seq
DB search
MMEASEFDRSLGMELYATSSPGCGGRLRAEVEDFAVEELAPDQRYGRGRYLVVEVEKAGW
ETHHLVRDLSRQLQISQKRFSWAGTKDKNAVTRQRMSIYGLEEGELVRANLPGVRIRALG
RSDRPVSLGDLRGNRFAVRIREIDLDDAEAARRLEAVTGEIRALGGLPNYFGVQRFGEVR
PVTHLVGEALVRGDPEGAAMIYLALPFPGEPESTRAARERLLADRDFSLALKEYPLRLRY
ERAMMARLQEEGDFARSFDVLAENLRRLFVHAYQSLLYNRILSRRMKSGLPLGRAVEGDV
VCFSKDGLPNPDKLQAVDGSNLSAVNRLADRGRAFVTLPLFGYGSEFAGGLPGEIERAVL
AEEGVELSDFRVDANPGLGSPGSRRAALLRVDPVVVVEEGSSALLKFDLPPGSYATVVLR
EYMKA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggcctcagagttcgaccggtccctggggatggagctctacgccaccagctcc
cccgggtgcggggggcggctccgggccgaggtcgaggacttcgccgtagaggagctggcc
ccagaccagaggtatgggagggggcgctacctcgtcgtggaggtggagaaggccggctgg
gagacccaccacctggtgagggacctctcccgccagctccagatcagccagaagaggttc
tcctgggcggggacgaaggacaagaacgccgtcacccgccagaggatgagcatatacggc
ctcgaggagggggagctggtccgggcgaacctccccggcgtcaggatcagggccctgggg
aggtcggaccggccggtatccctaggcgacctccgggggaaccggttcgccgtccgcatc
cgggagatcgacctcgacgacgccgaggcggcccgccggctggaggcggtcaccggggag
atccgggcgttaggcggcctgccgaactacttcggggtccagaggttcggggaggtgagg
ccggtcacccacctcgtcggagaggccctcgtcaggggagacccggagggggcggcgatg
atctacctcgccctccccttccccggggagccggagtcgacccgggcggcgagggagagg
ctcctcgccgaccgggacttcagcctggccctgaaggagtaccccctccggctccggtac
gagagggcgatgatggcccgcctccaggaggagggcgacttcgcccgatccttcgacgtc
ctcgccgagaacctccggaggctcttcgtccacgcctaccagtccctcctctataacagg
atcctatcccggaggatgaagtccggcctccccctggggcgggcggtggagggggacgtc
gtctgcttctcgaaggacggcctccccaaccccgataagctccaggccgtcgacgggtcg
aacctctcggccgtcaaccgcctcgccgatagggggagggcctttgtgaccctccccctc
ttcggatacggatcggagtttgccggaggcctcccgggggagatcgagagggcggtcctc
gccgaggagggggtcgagctatccgactttcgggtcgatgcaaaccccggcctcggctct
ccggggagccggagggccgccctcctcagggttgaccccgtcgtggtcgtcgaggaaggg
agctctgccctcctcaaattcgaccttcccccaggctcctacgccaccgtcgtcctaaga
gagtatatgaaggcgtag
DBGET
integrated database retrieval system
