Mycolicibacter hiberniae: MHIB_07350
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Entry
MHIB_07350 CDS
T06801
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mhib
Mycolicibacter hiberniae
Pathway
mhib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MHIB_07350 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhib03019
]
MHIB_07350 (deaD)
03009 Ribosome biogenesis [BR:
mhib03009
]
MHIB_07350 (deaD)
Enzymes [BR:
mhib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MHIB_07350 (deaD)
Messenger RNA biogenesis [BR:
mhib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MHIB_07350 (deaD)
Ribosome biogenesis [BR:
mhib03009
]
Prokaryotic type
rRNA helicases
MHIB_07350 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
ResIII
UvrA_inter
CMS1
HEM4
P-loop_SecA
Cas3-like_C_2
adh_short
Motif
Other DBs
NCBI-ProteinID:
BBZ22317
UniProt:
A0A7I7X0D0
LinkDB
All DBs
Position
760154..761896
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AA seq
580 aa
AA seq
DB search
MTSPDAPDELLSDPSAPSTSDSTPTFADLQIHPSVLRAVADVGYETPSAIQAATIPALLE
GSDVVGLAQTGTGKTAAFAIPILSRIDTTSKATQALVLAPTRELALQVAEAFGRYGAHLP
RINVLPIYGGASYTVQLSGLKRGAQVVVGTPGRVIDHLERGSLDLSHLDYLVLDEADEML
AMGFAEDVERILADTPEYKQVALFSATMPSAIRRITSRYLHDPVEVTVKAKTTTAENISQ
RYIEVAGPRKMDALTRVLEVEPFEAMIVFVRTKQATEEVAEKLRARGFSAAAINGDIAQA
QRERTITALKNGSIDILVATDVAARGLDVDRISHVVNYDIPNDPEAYVHRIGRTGRAGRS
GAALLFVSPRERHLLRLIEKVTRQKLVESELPSIDDVNAQRVAKFADAITSHLSSPSLEL
FRRLVEDYSREHNVPMADIAAALAVQSRDGEAFLMVEPPPDKRREHAKPGREGGRDDRKG
GPPKDGFATYRISVGKRHKVNPGAIVGALANEGGLHRSDFGNISIKVDHSLVELPAKLSG
KTLKALEQTRIQGQLIHLSRERPSGKPSRRPEGGHRKRTE
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgcctgatgcccccgatgagctcctctcggacccgtccgccccgtccacctcg
gactccactccgaccttcgccgacctgcagattcacccctcggtgctgcgggccgtcgcc
gatgtcggctatgagacgccctcggcgattcaggccgcaaccatcccggccctgctggag
ggttccgacgtggtcgggctggcccagaccggcaccggcaagaccgccgcgttcgccatt
ccgatcctgtcgcgcatcgacaccaccagcaaagccacccaggcgctggtgctcgcaccc
acccgcgagttggcactgcaggtggccgaggcgttcgggcgttacggcgcgcacctgccg
cggatcaacgtgctgccgatctacggcggggcctcctacactgtgcagctgtcggggctg
aagcgcggcgcgcaggtggtggtgggtacgccgggccgggtcatcgaccacctggaacgt
ggcagcctggatctgtcgcacctggactacctggtgctcgacgaggccgacgagatgctg
gcgatgggcttcgccgaagacgtcgaacgcatcctggccgacacgcctgagtacaagcag
gtggccctgttctcggcgaccatgccctcggccattcgccgcatcaccagccgttacctg
cacgacccggtcgaagtcaccgtcaaggcgaaaaccaccacggcggagaacatctcgcag
cgctacatcgaggtcgccgggccgcgcaagatggacgccctgaccagagtgctcgaagtc
gagcctttcgaagcgatgatcgtcttcgtccgtaccaagcaggccactgaggaggtcgcc
gagaagctgcgcgcccgcgggttttccgcggcggccatcaacggagatatcgcccaggcg
cagcgcgagcgcaccatcaccgcgctgaagaacggcagcatcgacatcctggtcgccacc
gatgtcgccgcccgcggcctggatgtcgaccgcatctctcacgtggtcaactacgacatt
cccaacgaccccgaggcctatgtgcaccggatcgggcgcaccggccgggccgggcggtcg
ggagccgcgctgctgttcgtcagcccccgcgagcgccatctgctgcggctcatcgaaaag
gtgacgcggcagaagctggtcgagtccgagctgcccagcatcgacgacgtcaacgctcag
cgggtcgcgaagttcgccgacgcgatcaccagccacctcagttccccgagcctcgagttg
ttccgccgcctggtcgaggactacagccgcgagcacaacgtccccatggccgacatcgcc
gccgcactggcggtgcagtcccgggacggcgaggcgttcctcatggtggaaccgccgccg
gacaagcgacgcgaacacgccaagccgggcagggaaggcggccgggacgaccgcaagggc
ggccccccgaaggacggattcgccacctaccggatctcggtcggcaagcggcacaaggtc
aacccgggtgccatcgtcggggcgctggccaacgagggcggcttgcaccgcagcgatttc
ggcaacatcagcatcaaggtggaccactcgctggtggagcttccggcaaagctgtccggc
aagacactcaaggcgttggagcagacccggattcagggacagctgatccacctgagtcgg
gaacggccgtccggtaagcccagtcgtcgtcctgaaggcgggcaccggaaacgcaccgaa
tga
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