Mycolicibacter hiberniae: MHIB_29270
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Entry
MHIB_29270 CDS
T06801
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mhib
Mycolicibacter hiberniae
Brite
KEGG Orthology (KO) [BR:
mhib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhib03019
]
MHIB_29270
Enzymes [BR:
mhib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MHIB_29270
Messenger RNA biogenesis [BR:
mhib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MHIB_29270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
NACHT
T2SSE
nSTAND3
ABC_tran
DUF3734
AAA_25
RsgA_GTPase
SLFN-g3_helicase
TsaE
Motif
Other DBs
NCBI-ProteinID:
BBZ24509
UniProt:
A0A7I7X3U6
LinkDB
All DBs
Position
complement(3064417..3068331)
Genome browser
AA seq
1304 aa
AA seq
DB search
MSEPSVAQLRTQLDGLTIRDAAYFGRRLKDLRGEQPEKLRQLAERMSAAQALIAQRRAAV
PAIGYPDLPVSARRDEIAAAISAHQVVVVAGETGSGKTTQLPKICLELGRGIRGTIGHTQ
PRRLAARTVAARIAEELATPLGDVVGYAVRFTDRVSDRTLIKLMTDGILLAELERDRRLL
RYDTLIIDEAHERSLNIDFLLGYLRELLPRRPDLKVIITSATIEPQRFAAHFAGPDGASA
PIVEVSGRSYPVEIRYRPLELPVVGDTDNDPDDPDHEIIRSQTRDEIEAIVDAVHELSAE
QPGDILVFLSGEREIRDTAEALGGLPNTEILPLYARLSTAEQQKVFAPARTGRRIVLATN
VAETSLTVPGIRYVIDPGNARISRYSRRLKVQRLPIEPISQASAAQRSGRCGRTAPGVCI
RLYSEADFEARPRYTDPEVLRTNLAAVLLRMASLRLGAVEDFGFLDPPDARSIRDGVQLL
VELGAFTADGQITDIGRRLARLPVDPRLGRMIVAAETEGCVREVLVLAAALTIPDPRERP
IDREEAARQKHARFADDDSDFIAYLNLWSYLSEQRKTLSGSAFRRMCRNEFLHYLRIREW
QDLVGQLRSIAGDVGIRDTADKPAAPAAIHAALLAGLLSHVGMRRSDGREYAGARNSKFV
LAPGSVLAKRPPRWTMVAELVETSRLFGRTAARIQPEAVERVAADLVQRSYSEPHWDAKR
GEVMAFEKVTLYGLPLVTRRRVGYARVEPVVAREMFIRHALVEGEWTARHRFLADNAALR
TQLQELEDRVRRRDLIVDDDTVYDLYDARIPAEVVSARHFDSWWKRQRQDTPELLTFTRD
ELLRTDETLGADRPDRWATADLALPLSYRFEPGAADDGVTVHVPIDVLARLHGDEFAWQV
PALREELVTALIRSLPKELRRNFVPAPDTARAVLSVIGTSTEPLLEALAGELRRRTGVLV
PVDAFDMTTLPAHLRVTFAVEAADGTELARGKDLAALQERLSASAREAIADAVGAELERT
GLRGWPDDLDTLPQTVQRVVAGRAVRGFPAFADAGGDAELRVFATEAQQRGALGPGIRRL
LRCEIPSPVKAVERQLDSQTRLMLKANPDGSLQALIDDCADAAADALVPAPVWTRDEFVA
LRKRVAAALVATTADVVTRVAQVLAAARETQVALPVQPPAAQAESIADITGQLEALLAPG
FVTATGRAHLGDLTRYLAAIRRRLEQLPRALQADRDRMARVQGVQQAYQDLLAVLPAARR
QDAAVREIARQIEELRVSLWAQQLGTPRPVSEQRIYRAIDALLA
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgagccgtccgtagcacagttgcgcacgcagctcgacggcctcaccatccgcgac
gccgcatactttggccggcggctcaaggatctgcgcggcgaacaaccggagaagctcagg
cagctggccgaacggatgagcgccgcacaggcgctgatcgcgcagcggcgcgccgcggta
ccggccatcggctaccccgacctgccggtcagtgcccgtcgcgacgagatcgccgcggcg
atcagtgcacaccaggtggtggtggtggccggtgaaaccggctcgggcaagaccacccag
ctgcccaagatctgcctggaactcggtcgcggaatccggggcaccatcggccacacccag
ccgcggcggctggccgcccgcactgtcgccgcgcgcattgccgaggaactggccaccccg
ctcggcgacgtcgtcggctatgcggtccgattcaccgaccgggtctctgaccgcaccctg
atcaagttgatgaccgacggcatcctgctcgccgaactggaacgcgaccggcggctgctg
cggtacgacaccttgatcatcgacgaagcccatgagcgcagcctcaacatcgactttctg
ctgggctacctgcgcgagttgctgccgcgccgcccggacttgaaggtgatcatcacttcg
gccaccatcgaaccccaacgtttcgcggcgcacttcgccggacccgatggcgccagcgcg
ccgatcgtcgaggtgtccgggcgcagctatccggtcgaaatccgctaccgcccgctggaa
ctgccggtggtgggcgataccgacaacgacccggatgacccggatcatgagatcattcgc
agccaaacccgcgacgagatcgaagccatcgtcgatgcggtgcacgaactttccgccgaa
caaccgggcgacatcctggtgttcttgtccggcgagcgtgagatccgggataccgcagaa
gctctcggtggactgcccaacaccgagatacttcccctgtatgcgcggctgtccaccgcc
gaacagcagaaggtgttcgcaccggcgcgcaccggcaggcggatcgtgctggccaccaac
gtggccgagacctctttgaccgttccgggaatccgttacgtcatcgatccgggcaacgcc
cgaatctcgcgctacagtcgccggctgaaggtgcagcggctgccgatcgagcccatctcg
caggcttcagcagcgcagcgcagcggccggtgcgggcgcaccgctcccggggtgtgcatc
cggctctacagcgaggcggacttcgaggcgcgcccgcgctacaccgatcccgaagtgctg
cggaccaacctggctgcggtactgctgcggatggcctcgcttcggttgggcgcggttgag
gacttcggttttctcgatccgcccgacgcccgcagcatccgcgacggcgtccagctgctg
gtcgagctcggtgccttcaccgcggacgggcagatcaccgacatcggccgccggctcgcc
cggcttccggtggatccgcggctgggccggatgatcgtggcggccgagaccgagggctgt
gtacgcgaagtgctggtgctcgcggccgcgctgaccatcccagacccgcgcgagcggccc
atcgatcgtgaggaggctgcccggcagaagcacgcccggttcgccgacgacgactccgac
ttcatcgcctacctcaacttgtggtcatatctgtccgagcagcgcaagacgttgagcggc
agtgccttccgccggatgtgccgaaatgagttcttgcactacctgcgaatccgggaatgg
caggatttggtcggtcagttgcgcagcatcgccggagatgtcggcatccgtgacacagcc
gacaagccggccgcacccgcggccatccatgccgcgctgctggccggcctgctgtcgcac
gtcgggatgcgccggtccgacggccgcgaatacgccggggcgcgtaactcgaaattcgtt
ctcgcccccggctcggtgctggccaaacggccgccgcgctggacgatggtggccgaactg
gtggaaaccagccggttgttcgggcggaccgccgcacgcatccaaccggaggcggtcgaa
cgggtggccgccgatctggtccagcgcagctacagcgagccgcactgggacgccaagcgc
ggcgaagtgatggccttcgagaaggtgacgctctacggcctgccgctggtcacgcgccgg
cgggtcggctacgccagggttgaaccggtggtggcccgcgaaatgttcatccggcatgcg
ctggtggagggcgagtggacggcccggcaccgcttcctggccgacaacgcggcgttgcgc
acccaactgcaggagttggaggaccgggttcggcgtcgcgacctgatcgtcgacgacgac
accgtttatgacctctacgacgcccggattcccgccgaggtggtgtcggcacgacacttc
gacagctggtggaaacgccagcggcaggacacgccggaactgctgaccttcacccgcgac
gagttgctgcgcaccgacgagacgctcggcgccgaccggccggacagatgggcgaccgcg
gatctcgcgttgccgttgagctaccgtttcgagccgggcgccgccgacgacggggtcacc
gtccacgtaccgatcgacgtcctggcccggcttcatggtgacgagttcgcctggcaggta
ccggcgttacgcgaagagctggtcaccgccctgatccggtccttgccgaaggagttgcgg
cgcaacttcgtaccggcgcccgacaccgcccgcgcagtgttgtcggtcatcggcacgtcg
accgaaccgctgctggaggctctggccggcgaactgcgccgccgcaccggggtgctcgtg
ccggtcgacgccttcgacatgaccacgttgccggcgcaccttcgggtcaccttcgcggtg
gaagccgccgacggcaccgagctggcccgcggcaaggatctggctgccctgcaggagcga
ctgtctgcatcggcccgtgaagcgatcgccgatgcggtcggcgcggagttggagcgcacc
gggctgcgcggctggccggacgacctcgacacccttccgcagaccgtccagcgggtggtg
gccggacgtgccgtgcgcggtttccccgccttcgccgacgccggcggcgatgccgagctg
cgggtgttcgccaccgaggcgcaacagcgcggcgcgctcggccccggcatccgcaggctg
ttgcggtgtgagatcccctctccggtcaaagcggttgagcgtcagctcgattcgcagacc
cgcctgatgctcaaagccaacccggacgggtcgctgcaagcgctgatcgacgactgtgct
gacgctgccgccgatgccttggtccccgcgccggtgtggacgcgagacgagttcgtcgcg
ctgcgcaagcgggtggctgcggccctggtcgccaccacggccgacgtcgtcacccgggtg
gcgcaggtgctggccgccgcgcgggaaacgcaggtggcgctgccggtgcagccgccggcg
gctcaggccgagtcgatcgccgacatcaccgggcagctggaggcattgctggcacccggg
ttcgtcaccgccacggggcgcgcacatctgggggacctcacccggtatctcgccgcgata
cgccgccggttggagcagttgccccgcgcgctgcaggccgaccgggaccggatggcgcgg
gtgcagggcgtgcaacaggcctaccaggacctgctggcggttctgcccgcggcacgtcgc
caggacgccgcggtgcgtgagatcgcccgccagatcgaagaactgcgggtgagcctgtgg
gctcagcaactcggaaccccgcgcccggtgagcgaacagcggatctaccgggcgattgat
gcgctactcgcttga
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