Mycolicibacter hiberniae: MHIB_30680
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Entry
MHIB_30680 CDS
T06801
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mhib
Mycolicibacter hiberniae
Pathway
mhib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MHIB_30680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhib03019
]
MHIB_30680
03400 DNA repair and recombination proteins [BR:
mhib03400
]
MHIB_30680
Enzymes [BR:
mhib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MHIB_30680
Messenger RNA biogenesis [BR:
mhib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MHIB_30680
DNA repair and recombination proteins [BR:
mhib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MHIB_30680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
AAA_22
KORA
Motif
Other DBs
NCBI-ProteinID:
BBZ24650
UniProt:
A0A7I7X5P3
LinkDB
All DBs
Position
complement(3207531..3209612)
Genome browser
AA seq
693 aa
AA seq
DB search
MTTRPQAQAILEQLAGPQARLRDDQWIAIEALVVARRRALVVQRTGWGKSAVYFIAAKLL
RASGHGPTVIVSPLLALMRNQVAAAERAGVHAATINSSNVTEWADVQRRVAAGDLDVLLV
SPERLNNPDFRDEVLPALAAKAGLVVVDEAHCVSDWGHDFRPDYRRIRTLIAELGADIPV
LATTATANDRVVADVAGQLGVGGSDTLVLRGGLDRESLRMSVVTAGGPAQRAAWIGAHLE
KLPGSGIVYTLTVAQAHDVAADLRAQGFAVAAYTGSTDSADREQLEADLLANRVKALIAT
SALGMGFDKPDLGFVVHLGAPSSPIAYYQQVGRAGRATASAEVILLPGTEDQDIWHYFAS
LAFPAESLVRKVIGELSPDQPLSTPALEARVDLNRSRLEMVLKVLDVDGAVRRVKGGWLG
TGAQWTYDEQRYRKLEELRRAEQQAMLDYQATGDCRMSFLRAQLNDPQLQAGERCGRCDN
CAGPRFDGEVDATAAAATRERLMRPGVEITPRRQWPSGLAQLGVDLSGRITDGPQPGRVI
GRLTDLGWGVRLRRLLDEPDREVPDDVVRAAVNVLAGWEWQQRPTAVMALDSTTHPVLIG
SLADRLAELGRLVRLDTLRYAPGRRATAAANSAYRVAALQGCWQPPAPLPAGVGPVLLID
DVTDTGWTLTMAARVVRAAGAPQVLPFALASVN
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgacgacacggccgcaggcccaggcgattctggaacagctggccggaccgcaggcgcgg
ctgcgcgacgaccagtggatcgcgattgaggcgctggtggtggctcgccgccgcgcgctg
gtggtgcagcgaaccggctggggcaagtcggcggtgtatttcatcgccgcgaagctgttg
cgggccagcggccacggtccgacggtgatcgtgtcgccattgctggcgctgatgcgcaac
caggtcgcggcagcggagcgtgccggtgtgcatgcggccaccatcaactcctcgaacgtc
accgaatgggcagacgtgcaacgccgggtggccgccggtgatctcgacgtgttgctggtc
agcccggagcggctcaacaatccggacttccgcgatgaagtgttaccggcgctggccgct
aaggccgggctggtcgtggtcgacgaggcgcactgcgtgtcggactggggccacgacttc
cggccggactaccggcgtatccgcacgctgatcgccgagctcggcgccgacatcccggtg
ctggcgaccacggcgaccgccaacgaccgggtggtcgccgacgtcgcgggccagctcggg
gttggcggcagcgacacgctggtgctgcgtggcggcctggaccgcgagtcgcttcggatg
tcggtggtgaccgccggtggaccggcgcagcgcgccgcctggatcggcgctcacctggag
aagctgcccggatccgggatcgtctacacgctcactgtggcccaagcccacgacgtggcc
gccgacctgcgcgctcaggggttcgcggtggccgcctacaccggctcgaccgactcggcc
gatcgcgagcagctcgaggccgatctgctggccaaccgggtcaaagcgctgatcgccacc
tcggcgctgggcatgggattcgacaagcccgacctgggtttcgtggtccacctgggtgca
ccgtcctcgccgatcgcctactaccagcaggtcggtcgtgccgggcgcgccaccgccagc
gccgaggtgatcctgttgcccggcaccgaggaccaagacatctggcactatttcgcgtcg
ctggccttccccgcggagtccttggtgcgcaaggtgatcggtgaactgtcgcccgatcag
ccgctctcgaccccggcgctggaagcgcgggtcgacctgaaccggtcgcggttggagatg
gtgctcaaggtcctcgatgtcgacggcgcagtgcgccgagtcaagggtggctggctgggc
accggcgcgcagtggacctacgacgagcagcgctaccgcaagctcgaggaactgcgccgg
gcagagcagcaggcgatgctggactaccaggccacgggcgactgccgcatgagtttcctg
cgtgcccaactgaacgacccgcagctgcaggcgggggagcgttgcgggcgctgcgacaac
tgcgccgggccgcggtttgacggcgaagtggacgccaccgccgccgccgccacccgtgaa
cggttgatgcgccccggagtggagatcacgccgcggcggcagtggccgtcgggactggcg
cagctcggggtggacttgtcgggccggatcaccgacggaccgcaacccggccgggtgatc
ggccggctcaccgacttggggtggggcgtgcggctgcgtcgcctgctcgacgagccggac
cgcgaggttcccgacgacgtggtgcgcgcggctgtgaacgtgttggccggctgggagtgg
cagcaacggcccaccgcggtgatggcactggattcgacgacccacccggtgctgatcggt
tcgctcgccgaccggctggccgagctcggtcgcctggtgcgcctggacaccctgcggtat
gcgcccggccggcgcgcgacggcggcggccaattcggcttaccgggtcgccgcgctgcag
gggtgctggcagccgccggcgccgcttcccgccggcgtcggtccggtgctgttgatcgac
gacgtgaccgacaccggctggacgctgaccatggcggcccgcgtggtgcgcgcggccgga
gcgccgcaggtcttgccgttcgccctggccagcgtgaactag
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