Mesomycoplasma hyopneumoniae J: MHJ_0056
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Entry
MHJ_0056 CDS
T00260
Symbol
rpoD
Name
(GenBank) DNA-directed RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
mhj
Mesomycoplasma hyopneumoniae J
Brite
KEGG Orthology (KO) [BR:
mhj00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MHJ_0056 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhj03021
]
MHJ_0056 (rpoD)
Transcription machinery [BR:
mhj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MHJ_0056 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AAZ44150
LNCC_Brazil:
MHJ0056
UniProt:
Q4AAX6
LinkDB
All DBs
Position
66263..68293
Genome browser
AA seq
676 aa
AA seq
DB search
MLKKQLKFPKQESFIDFSLLEKTQKTKKIIDKKVSSISVEEIKMENSLKKVNIEEGKKTD
LTREDGIKKPKNTKKANLRERRKNSYEQIENFFNIIKTSKHQSDFLKNLEQFRAKTLLQL
SQNINSTSLAQKSKKEEKSKQKTEKQLNSTLVSPKKPVKKAKTNSVKEKLTKIIPVKKPD
NIDLPKKITENKELFPQKEDFIPISNINQNSSEYNFIIEKLEQELEQKHQKIGKNSSNLD
NFSIFLSHDEIYKYIEKWNLAIEEEKLDDFFQTLIQRKIIADEVDKEDLENVSSFDFAEQ
INNKKSVRDKKNKKYSQDFDQSLINLDDQNFDINHNEEDDNSDLNLGQSVDDSLKIQEID
DLDYITENSPNQYHKPKVYSDEVYLNKLTDTSDMIKWYMRWIGKYGKLLTAEEERELAKK
MKIKGRIGKKARDTLIKRNLRLVVNSAKRYKNRGLGFIDLISEGNLGIIKAVAKYDYTRG
FKFSTYATWWIRQAITRAVADQARLIRIPVHMVETINKINKVERELQQEKGLNPTAEEIS
ERLDGEFSPDKIRYIKKINIDPISLDKAIGKEEDSSFSDFIKDENMISPVDYAIREEKAK
VLLEMIDSTLDYDERDFIKRRYGVGTNDEGIPYQAHSFEELAAMRRVTKERVRQIEAKIL
KKLRTPHRRLSLRDFN
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaaaacagttaaaattcccaaaacaagagagttttattgatttttcgttgcta
gaaaaaacgcagaaaacaaaaaaaattattgataaaaaagtttcaagtattagtgtagaa
gagataaaaatggaaaattcattaaaaaaagtaaatatagaagaaggaaaaaaaacagat
ttaacaagagaagatggaattaaaaagccaaaaaatacaaaaaaagcaaatcttcgtgag
cgaagaaaaaattcatacgagcaaatcgaaaattttttcaacattatcaaaacatcaaaa
caccaatcagattttttaaagaatttagaacaatttcgagcaaaaactttattgcaacta
tctcaaaatattaattcaactagtttggctcagaaatcaaaaaaagaagaaaaatctaaa
caaaaaacagaaaaacagctaaattccaccctggtatcccccaaaaaacccgtaaaaaaa
gctaaaacaaattcagttaaggaaaaactaactaaaattatcccagtcaaaaaacctgat
aatatagatttacctaaaaaaataacagaaaataaagaacttttcccccaaaaagaggat
tttattccaatttctaatattaatcaaaatagttctgaatataattttattatcgagaaa
ttagaacaagaattagaacaaaaacaccaaaagataggaaaaaatagttctaatttagat
aatttttctatttttttaagtcacgatgaaatttataaatatattgaaaagtgaaatctt
gcaattgaagaagaaaaacttgatgatttttttcaaactttaatacaaagaaaaataatt
gctgatgaagtcgataaggaggatcttgaaaatgtttcaagttttgattttgccgagcaa
attaataataaaaaatctgttagagataaaaaaaataaaaaatatagtcaagattttgat
cagtcactaataaacttagatgatcaaaatttcgatattaatcataacgaggaagatgat
aattctgacctaaatctaggacaatcagtcgatgattccttaaaaattcaggaaattgac
gacctggattatataacagaaaatagtccaaatcaataccacaaaccaaaagtttatagt
gatgaagtttaccttaacaaactgaccgatacaagtgatatgataaaatggtatatgcgt
tggattggaaaatatggaaaacttttaacggctgaagaagaaagagaacttgcaaaaaaa
atgaaaatcaaaggccggattggaaaaaaagcgcgtgataccttaataaaacggaattta
cgtttggtggttaacagtgcaaaacgctataaaaaccgcggtcttggatttatcgatcta
atctcagagggaaacctcggtattattaaagcagttgcaaaatatgactatacccgtgga
tttaaattctcaacttatgcaacctgatgaatccgccaagcgattacaagggcggttgcc
gaccaagcccggctcattcgaattccggttcacatggtcgagacaatcaataaaattaat
aaggtagaaagggaattacaacaagaaaaaggacttaatccaacagccgaagaaatttca
gaacgtttagatggcgaatttagccctgataaaatacggtatattaaaaaaatcaatatc
gatccaatttcactagataaagcaattgggaaagaggaagatagttcattttctgatttt
atcaaggatgagaatatgatttccccagtagattatgcaattcgtgaggaaaaagcgaaa
gttttgcttgaaatgatcgattcaacacttgattatgatgaaagagattttatcaaaaga
cgttatggggtcggaacaaacgatgaaggaattccttatcaggcccatagttttgaagag
cttgcggcgatgcgtcgagtaacaaaagagagggttaggcaaattgaggcaaaaattcta
aaaaaattaagaaccccacatcgccgcctatcattaagggattttaattaa
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