Metallosphaera hakonensis JCM 8857 = DSM 7519: DFR87_05790
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Entry
DFR87_05790 CDS
T05471
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mhk
Metallosphaera hakonensis JCM 8857 = DSM 7519
Brite
KEGG Orthology (KO) [BR:
mhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mhk03016
]
DFR87_05790 (truD)
Enzymes [BR:
mhk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
DFR87_05790 (truD)
Transfer RNA biogenesis [BR:
mhk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DFR87_05790 (truD)
Prokaryotic type
DFR87_05790 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DUF3994
Motif
Other DBs
NCBI-ProteinID:
AWR99295
UniProt:
A0A2U9ITI9
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All DBs
Position
1208898..1209995
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AA seq
365 aa
AA seq
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MLDLDLAIGIELRLHDWPPIEATISRPEGFKVIEEVDGKPCSQWTGLRDGKFAVYLLKKR
GIDHFSVISRLSSVLKERPGYLGIKDANAITEQLIYTRRKIIESYSEQSFSIEFRGFIDG
KINHTGNIFEIELITENKDEVKERAEILRREGLLPAFIGYQRFGTRRPITHLVGKAITER
DWCKAVEYILGYPFIWENVDIKKFRLAYMEGRVTDDLLERIPKQERSVYLELARGNCLSA
LKKSSVKPSFYVEAYQSYLFNRILSRKLLRSKIFERDEILVPTKPEDCDTECREVFDEEG
IDKGSFYIEEVGVNLRPLRRKAFMNVSSIRVDVHNNLKIMFSLERGMYATLVLSEILNTD
PKNFT
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatttagacttagccattggaatagagctccgattacatgattggcctccaata
gaggctaccataagtagacctgagggatttaaggtaatagaggaagtagatggaaagcca
tgttcccaatggacagggctaagagatggtaagtttgcagtctatcttcttaaaaagagg
ggaatagatcacttctcagttatctcgagactgtcatccgtcttgaaagagagaccagga
tatctggggataaaggacgctaacgccataaccgaacaattgatctatacaaggagaaaa
atcattgagtcttattctgagcaatcattttcgatcgagttcagaggttttatagatggc
aaaattaaccatactggtaatatttttgaaatagaactgattactgaaaacaaagatgag
gtgaaagagagggccgagattctaagaagggaaggattgttgccagctttcattggttac
caacgttttgggactaggagaccaattacacacctagtggggaaggcgatcacggaacgc
gactggtgtaaggctgtggagtacattctagggtatcccttcatatgggagaacgtcgac
atcaagaaatttagattggcctacatggaggggagagttacagatgatctccttgagagg
atacctaaacaagagaggtcggtttacttggaacttgccagaggcaattgcttgtcagct
ttaaagaagtcaagtgtgaagcccagcttctacgtggaggcatatcagagttatctattt
aacaggatactatcgagaaaattgttgagatctaagatatttgagcgggacgaaatattg
gtacctaccaagcccgaagattgcgataccgagtgccgtgaggtatttgatgaagagggg
atagataaagggtcattctatattgaagaagtcggggttaacctcagaccattgaggaga
aaggctttcatgaacgtgagctctataagagttgacgttcataataacttaaaaataatg
ttctccttagagagaggtatgtatgccaccctcgtcctctcagaaattctaaacactgac
ccaaaaaactttacttag
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