Metallosphaera hakonensis JCM 8857 = DSM 7519: DFR87_06880
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Entry
DFR87_06880 CDS
T05471
Symbol
tfe
Name
(GenBank) transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
mhk
Metallosphaera hakonensis JCM 8857 = DSM 7519
Pathway
mhk03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mhk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DFR87_06880 (tfe)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhk03021
]
DFR87_06880 (tfe)
Transcription machinery [BR:
mhk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
DFR87_06880 (tfe)
Prokaryotic type
Archaeal type
TFE
DFR87_06880 (tfe)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
HTH_9
Zn_ribbon_IS1595
Zn_Ribbon_TF
HTH_20
Rv2175c_wHTH
HypA
EAD9
HTH_Crp_2
TrmB
GntR
Phage_rep_org_N
Mut7-C
Pedibin
DnaD_N
Rad50_zn_hook
HTH_PafC
Zn_ribbon_FGT1_2
HTH_Cmi2_C
Zn_ribbon_TFIIB
HVO_2753_ZBP
DUF7342
RPA_interact_C
zf_C2H2_10
MerR-DNA-bind
Motif
Other DBs
NCBI-ProteinID:
AWS00610
UniProt:
A0A2U9IX65
LinkDB
All DBs
Position
1386179..1386685
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AA seq
168 aa
AA seq
DB search
MKDMARDLLGEDVIDVLSFLLDNKAELTDEEMANKLNVKVNEVRKKLYALADHGLVSYRR
TRDKESGWYVYFWKANVDQINELLLARKREILNKLKARLEYESNNEFYICPEDKTKYTFE
EAFENEFKCPKCGVQLTYYDSARVRELLEQKIKEIEEEIARETKVGSS
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatatggctagagacttgttgggagaggatgttatagacgttctgtcatttcta
ttggataataaagctgaactaactgatgaggaaatggcaaacaagttgaatgtaaaggtc
aatgaagttagaaagaagctatatgcattagcagatcatgggttggtgagctataggaga
accagagataaagaatcggggtggtatgtatacttctggaaagccaacgtggatcaaata
aatgaactgcttttggcacgaaagagggagatcctaaataagctgaaggccagattagag
tacgaatccaataacgagttctatatttgtcctgaggataaaactaaatatacgtttgag
gaagcgtttgaaaacgagtttaagtgccctaaatgtggagttcagcttacttattacgac
tccgctagggtaagggagctcttagagcagaagataaaggagattgaagaggaaatcgct
agggagacaaaggttgggagctcctaa
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