Metallosphaera hakonensis JCM 8857 = DSM 7519: DFR87_11560
Help
Entry
DFR87_11560 CDS
T05471
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mhk
Metallosphaera hakonensis JCM 8857 = DSM 7519
Pathway
mhk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mhk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DFR87_11560 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhk03400
]
DFR87_11560 (xth)
Enzymes [BR:
mhk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
DFR87_11560 (xth)
DNA repair and recombination proteins [BR:
mhk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DFR87_11560 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AWS00216
UniProt:
A0A2U9IW33
LinkDB
All DBs
Position
complement(2218891..2219595)
Genome browser
AA seq
234 aa
AA seq
DB search
MSKGLIELIKNLEYDVLMLQEVKTSQLPLDFQFLPYKAFLNPSKRKGYSGTLTLSRMEPI
SVKYGIGAEEFDDEGRVITLEFPSLYVINVYFPNSGEELKRLDFKLKFDQKFQEFVQGLK
KPTVICGDFNVAHEEIDIARPKDNVNHAGFTPEERKWFHEFLSTGFIDTFRMFVKDGGHY
SWWSYRFHAREKNIGWRIDYCLVSKELEPMVKKAEILEKVLGSDHAPVVLELMD
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagggactaattgaacttatcaagaatctggagtacgacgtgttaatgctccag
gaagtgaagacgagccagctccctctagacttccaatttctcccgtataaggccttctta
aatccatcaaaaaggaaaggatatagcgggacccttaccctatctagaatggagcctata
tccgtgaaatacggaatcggcgcggaggaatttgatgatgaaggaagggtcatcactctt
gaattccccagtctctacgtcatcaatgtgtactttcccaattctggagaggagttaaag
agattggacttcaagcttaagttcgatcagaaattccaagaattcgttcaaggactgaag
aaacccactgttatttgcggagattttaacgtggcccatgaggagattgatattgcgagg
cctaaggataacgtgaatcacgcaggtttcacaccggaagagaggaagtggtttcatgaa
ttcctttcaactggcttcattgataccttcaggatgtttgtaaaggatggaggacattac
tcctggtggtcatataggtttcacgctagggaaaagaacataggctggagaattgattac
tgccttgtctctaaggaacttgaaccgatggtgaagaaagccgaaattctagaaaaggtg
ttgggatctgaccatgcgcctgtcgttcttgaattaatggactag
DBGET
integrated database retrieval system
