Mesomycoplasma hyorhinis MCLD: SRH_02430
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Entry
SRH_02430 CDS
T01945
Name
(GenBank) formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mhm
Mesomycoplasma hyorhinis MCLD
Pathway
mhm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mhm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SRH_02430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhm03400
]
SRH_02430
Enzymes [BR:
mhm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SRH_02430
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SRH_02430
DNA repair and recombination proteins [BR:
mhm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SRH_02430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF5816
Zn_ribbon_IS1595
zf-RING_6
Motif
Other DBs
NCBI-ProteinID:
AEC46036
LinkDB
All DBs
Position
526997..527833
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AA seq
278 aa
AA seq
DB search
MPELPEVVTVVNQLNEKIINKKVVSVKLYKEKLLKNSTVEQLENWFVNEKILSVKNKGKF
IVFYFSNDKILISHLRLNGKYFFNNSSKKEPHNHLMIQFDDNTFLHYNDTRMFGTFHIKT
TKDYLNTTPLSNVGPTPMEISEEELFNKLQKSKRSIKPTLLDQQIVSGLGNIYVDEVLFA
CSIHPLTKAFLINKNELKLIKKFATSILLKSIELGGSTINSYSSLNMQEGNFQNFLQVHT
KKGFACSRCNNIIEKITVGGRGTYICSNCQNEKKQSKL
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaagttgttacagttgttaatcaactaaatgaaaaaattatcaat
aaaaaagtagtttctgtcaaactttataaagaaaaattactaaaaaattccacagttgag
caattagaaaactgatttgtaaatgagaaaattttaagtgtaaaaaacaaaggaaaattc
attgttttttattttagtaatgacaaaattctaatttctcatttaaggttgaatgggaaa
tatttttttaataactcatctaaaaaagaaccacacaatcatttgatgattcaatttgat
gataatacttttttacattacaatgacacaaggatgtttggtacttttcatattaaaaca
acaaaagattatttaaacacaactcctttatctaatgttggaccaactccaatggaaatt
agtgaagaagaattatttaataaattacaaaaaagtaaaagatctattaaaccaacttta
ctagatcaacaaattgtttctggtttgggaaatatttatgttgatgaagttctttttgct
tgttcaattcatcccctaactaaagcgtttttgataaacaaaaatgaattaaaattaatt
aaaaaattcgccacttcaatattattaaaatcaatagaactaggtggttcgacaattaat
tcatattcctccttaaatatgcaagagggtaattttcaaaattttttacaagttcatact
aaaaaaggttttgcttgttcaagatgtaataatataatagagaaaattacagtaggagga
agaggaacatatatttgttccaattgtcaaaatgaaaaaaaacaaagtaaactataa
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