Mesomycoplasma hyorhinis MCLD: SRH_03120
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Entry
SRH_03120 CDS
T01945
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mhm
Mesomycoplasma hyorhinis MCLD
Brite
KEGG Orthology (KO) [BR:
mhm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mhm03016
]
SRH_03120 (truB)
Enzymes [BR:
mhm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SRH_03120 (truB)
Transfer RNA biogenesis [BR:
mhm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SRH_03120 (truB)
Prokaryotic type
SRH_03120 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AEC46166
LinkDB
All DBs
Position
653947..654813
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AA seq
288 aa
AA seq
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MIKLLYKPTNITSFKFIKNYARENNITKIGHTGTLDPLASGLMLIATDEDTKFIPYIDTQ
DKEYIVKLKFGFISDTYDIEGEIEEFSQNKVTLKQIEEQLKILVAKEEQLPPVFSAKKVN
GQRSYDLARQNKFLDLKPIKIKVLEYNILNFDHSQQTLELQFRVSRGTYIRTLVHDLGQM
LKIGAIMVELTRTKINFLDFSFLNQDLNVLDLIHLSQTKIDKFQLQQLMQGKVVSFEQNY
KDQEETLLVFLNQAVGIATIKNKFLKSTKLFGNKIKIILNEQGNKNDK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgattaaactactttataaaccaaccaacattacatcatttaagtttattaaaaactat
gctagagaaaataatattacaaaaattggacacactggaacattagatcctttagcgtca
gggctaatgctaatagcaacggatgaggacacaaaatttataccttatatcgacacacaa
gacaaagaatatattgttaaattaaaatttggttttatttcagacacatacgatattgaa
ggtgaaatagaagaattttctcaaaataaagtaactttaaagcaaatagaagaacaatta
aaaattttagttgctaaagaagaacagctaccaccagttttttcagctaaaaaagttaat
ggtcaacgttcatatgatttagctcgacaaaacaagtttttagacttaaaacctataaaa
ataaaggtattagaatataatattttaaattttgatcacagccaacaaacacttgaatta
caatttagagtctcaagaggaacatatataagaactttagttcacgatttaggtcagatg
ttgaaaattggtgcaattatggtagaattaacaagaactaaaataaattttttagatttt
tcttttttaaatcaagatttaaatgttttagatttaatacatttgagtcaaaccaaaata
gacaaatttcaattacaacaacttatgcaaggaaaggttgtttcttttgaacaaaattac
aaagatcaagaagaaactttattagtatttctaaatcaggcagtaggtattgcaactatt
aaaaacaagtttttaaaatctacaaaactttttggtaataagataaaaataatattaaac
gaacaaggaaataaaaatgataagtaa
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