Mesomycoplasma hyorhinis MCLD: SRH_04050
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Entry
SRH_04050 CDS
T01945
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mhm
Mesomycoplasma hyorhinis MCLD
Pathway
mhm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SRH_04050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhm03021
]
SRH_04050
03400 DNA repair and recombination proteins [BR:
mhm03400
]
SRH_04050
Enzymes [BR:
mhm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SRH_04050
Transcription machinery [BR:
mhm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SRH_04050
DNA repair and recombination proteins [BR:
mhm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SRH_04050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_A_bac
RNA_pol_L_2
HHH_5
Cadherin_pro
DUF6549
Motif
Other DBs
NCBI-ProteinID:
AEC46346
LinkDB
All DBs
Position
826192..827193
Genome browser
AA seq
333 aa
AA seq
DB search
MKKSAKVYYIENKAEHLSDFETTFELQPLERGFANTLGNSLRRTILSSVPSVAVFGVKIE
GVEHEFSVIDKVREDVVTILNNLKKLRFSFKKEVFLQNEIQVASFDGRKVGKITGADILV
NSALEIVNKDQVVANTSEVGALKFEMFLTYGRGFVDFETNKRKIQELGPALESKLGYGQI
IAVDSDFSAVENVKFSSTELNSSNPIVEEKLTFSVKTDGTILAKDALAEAAKILIAHLKL
VSDTANLDAEVDSFFEEVKQKEEAPKKNSADLTTLDLTVRSLNALRRAQYYKISDLLELT
LEELENIKNLGKKSVEEIVEKLKEHNLELKKGE
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagtgcaaaagtgtactacattgaaaataaagctgaacatctttctgatttt
gaaacaacatttgaattacaacctcttgaacgtggttttgctaacacattaggaaattcg
ctaagaagaacaattctatcatctgttccttcagtagcggtttttggtgttaaaattgag
ggtgtagaacacgaattttcagtaatagataaagttcgtgaagatgttgttacaatttta
aataatcttaaaaaattacgttttagcttcaaaaaagaagtatttttacaaaatgaaatt
caagtagcttcctttgatggaagaaaagttggaaaaattacaggagctgatattttagta
aattcagcacttgaaattgttaacaaagaccaagtcgttgcaaatacttccgaagttgga
gctttaaaatttgaaatgtttttaacttatggtcgtggttttgttgattttgaaacaaat
aaaagaaaaattcaagaacttggtcctgcattagaatctaaattaggttatggtcaaata
atcgctgttgattctgacttttcagctgttgaaaatgttaaattttcatctactgaatta
aactcttcaaatccaattgttgaagaaaaactaactttttcagttaaaactgatggaaca
attttagccaaagatgcacttgctgaagctgctaaaattttaattgcacatttaaaatta
gttagtgatacagcaaatttagatgctgaagttgattcattttttgaagaagtaaaacaa
aaagaagaagcaccgaagaaaaactcagcagatttaactacattggatctcacagttaga
tcattaaacgcgcttcgtagagcacaatattataaaatttctgatttattagaacttacc
ttagaagaacttgaaaacattaaaaatttaggtaaaaaatcagtagaagaaatagttgaa
aaattaaaagaacataatttagaacttaaaaaaggagaataa
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